Objective
SUMO (small ubiquitin-like modifier) is a small peptide that can be covalently attached to target proteins in an analogous way to ubiquitin. SUMO is involved in transcriptional regulation, sub-cellular partitioning, stress response, and DNA damage response, among other processes. The roles for the SUMO conjugation pathway have been mainly addressed using transformed cell lines and yeast. To address the relevance of the SUMO conjugation pathway in a living organism, I will use the round worm, Caenorhabditis elegans, a multicellular eukaryotic organism simple enough to be studied in great detail. I plan to characterize the SMO-1 (the C. elegans orthologue of SUMO) proteome using high accuracy mass spectrometry (MS). Moreover, dynamic changes in the SMO-1 proteome in response to ionizing radiation as well as tissue-specific SMO-1 sub-proteomes will be assessed taking advantage of the recently developed SILAN (stable isotope labeling with amino acids in nematodes) technique. In parallel, the role of SMO-1 conjugation in the DNA damage response and meiotic recombination will be addressed by genetically altering the conjugation pathway. I will also study the dynamics of specific SMO-1 conjugates after ionizing irradiation, by applying multiple reaction monitoring (MRM)-mass spectrometry. The role of SMO-1 modification of selected target proteins will be addressed by generating transgenic strains carrying a sumoylation deficient allele. Overall, this project combines high accuracy mass spectrometry and the nematode C. elegans to provide insights into the biological consequences of dynamic, tissue-specific SUMO conjugation. Importantly, this project will guarantee a leading role for the European Research Area in this field and the expertise I will obtain with Dr Hay will be vital for carrying out my future career as independent researcher.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: https://op.europa.eu/en/web/eu-vocabularies/euroscivoc.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: https://op.europa.eu/en/web/eu-vocabularies/euroscivoc.
- natural sciences biological sciences biochemistry biomolecules proteins proteomics
- natural sciences biological sciences genetics DNA
- natural sciences physical sciences nuclear physics
- natural sciences chemical sciences organic chemistry amines
- natural sciences chemical sciences analytical chemistry mass spectrometry
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Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
FP7-PEOPLE-2011-IIF
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Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Coordinator
DD1 4HN Dundee
United Kingdom
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.