Forschungs- & Entwicklungsinformationsdienst der Gemeinschaft - CORDIS

PhenoMeNal: A comprehensive and standardised e-infrastructure for analysing medical metabolic phenotype data

Von 2015-09-01 bis 2018-08-31, Laufendes Projekt

Projektdetails

Gesamtkosten:

EUR 8 018 723,75

EU-Beitrag:

EUR 7 697 733,75

Koordiniert in:

Germany

Aufruf zur Vorschlagseinreichung:

H2020-EINFRA-2014-2See other projects for this call

Finanzierungsprogramm:

RIA - Research and Innovation action

Ziel

Deliverables

Publications

  • Gelified Biofluids for High-Resolution Magic Angle Spinning 1 H NMR Analysis: The Case of Urine
    Author(s): Panteleimon G. Takis, Leonardo Tenori, Enrico Ravera, Claudio Luchinat
    Published in: Analytical Chemistry, issue 89/2, 2017. Page(s) 1054-1058.  ISSN: 0003-2700
    DOI: 10.1021/acs.analchem.6b04318
  • Entropy-Based Network Representation of the Individual Metabolic Phenotype
    Author(s): Edoardo Saccenti, Giulia Menichetti, Veronica Ghini, Daniel Remondini, Leonardo Tenori, Claudio Luchinat
    Published in: Journal of Proteome Research, issue 15/9, 2016. Page(s) 3298-3307.  ISSN: 1535-3893
    DOI: 10.1021/acs.jproteome.6b00454
  • KODAMA: an R package for knowledge discovery and data mining
    Author(s): Stefano Cacciatore, Leonardo Tenori, Claudio Luchinat, Phillip R. Bennett, David A. MacIntyre
    Published in: Bioinformatics, 2016. Page(s) btw705.  ISSN: 1367-4803
    DOI: 10.1093/bioinformatics/btw705
  • Power Analysis and Sample Size Determination in Metabolic Phenotyping
    Author(s): Benjamin J. Blaise, Gonçalo Correia, Adrienne Tin, J. Hunter Young, Anne-Claire Vergnaud, Matthew Lewis, Jake T. M. Pearce, Paul Elliott, Jeremy K. Nicholson, Elaine Holmes, Timothy M. D. Ebbels
    Published in: Analytical Chemistry, issue 88/10, 2016. Page(s) 5179-5188.  ISSN: 0003-2700
    DOI: 10.1021/acs.analchem.6b00188
  • The Ontology for Biomedical Investigations
    Author(s): Anita Bandrowski, Ryan Brinkman, Mathias Brochhausen, Matthew H. Brush, Bill Bug, Marcus C. Chibucos, Kevin Clancy, Mélanie Courtot, Dirk Derom, Michel Dumontier, Liju Fan, Jennifer Fostel, Gilberto Fragoso, Frank Gibson, Alejandra Gonzalez-Beltran, Melissa A. Haendel, Yongqun He, Mervi Heiskanen, Tina Hernandez-Boussard, Mark Jensen, Yu Lin, Allyson L. Lister, Phillip Lord, James Malone, Elisabetta Manduchi, Monnie McGee, Norman Morrison, James A. Overton, Helen Parkinson, Bjoern Peters, Philippe Rocca-Serra, Alan Ruttenberg, Susanna-Assunta Sansone, Richard H. Scheuermann, Daniel Schober, Barry Smith, Larisa N. Soldatova, Christian J. Stoeckert, Chris F. Taylor, Carlo Torniai, Jessica A. Turner, Randi Vita, Patricia L. Whetzel, Jie Zheng
    Published in: PLOS ONE, issue 11/4, 2016. Page(s) e0154556.  ISSN: 1932-6203
    DOI: 10.1371/journal.pone.0154556
  • MIDcor, an R-program for deciphering mass interferences in mass spectra of metabolites enriched in stable isotopes
    Author(s): Vitaly A. Selivanov, Adrián Benito, Anibal Miranda, Esther Aguilar, Ibrahim Halil Polat, Josep J. Centelles, Anusha Jayaraman, Paul W. N. Lee, Silvia Marin, Marta Cascante
    Published in: BMC Bioinformatics, issue 18/1, 2017.  ISSN: 1471-2105
    DOI: 10.1186/s12859-017-1513-3
  • Workflow for Integrated Processing of Multicohort Untargeted 1 H NMR Metabolomics Data in Large-Scale Metabolic Epidemiology
    Author(s): Ibrahim Karaman, Diana L. S. Ferreira, Claire L. Boulangé, Manuja R. Kaluarachchi, David Herrington, Anthony C. Dona, Raphaële Castagné, Alireza Moayyeri, Benjamin Lehne, Marie Loh, Paul S. de Vries, Abbas Dehghan, Oscar H. Franco, Albert Hofman, Evangelos Evangelou, Ioanna Tzoulaki, Paul Elliott, John C. Lindon, Timothy M. D. Ebbels
    Published in: Journal of Proteome Research, issue 15/12, 2016. Page(s) 4188-4194.  ISSN: 1535-3893
    DOI: 10.1021/acs.jproteome.6b00125
  • Data standards can boost metabolomics research, and if there is a will, there is a way
    Author(s): Philippe Rocca-Serra, Reza M. Salek, Masanori Arita, Elon Correa, Saravanan Dayalan, Alejandra Gonzalez-Beltran, Tim Ebbels, Royston Goodacre, Janna Hastings, Kenneth Haug, Albert Koulman, Macha Nikolski, Matej Oresic, Susanna-Assunta Sansone, Daniel Schober, James Smith, Christoph Steinbeck, Mark R. Viant, Steffen Neumann
    Published in: Metabolomics, issue 12/1, 2016.  ISSN: 1573-3882
    DOI: 10.1007/s11306-015-0879-3
  • Global open data management in metabolomics
    Author(s): Kenneth Haug, Reza M Salek, Christoph Steinbeck
    Published in: Current Opinion in Chemical Biology, issue 36, 2017. Page(s) 58-63.  ISSN: 1367-5931
    DOI: 10.1016/j.cbpa.2016.12.024
  • A computational solution to automatically map metabolite libraries in the context of genome scale metabolic networks
    Author(s): Nils ePaulhe; Benjamin eMerlet; Yoann eGloaguen; Clément eFrainay; Nathalie ePoupin; Fabien eJourdan; Maxime eChazalviel; Florence eVinson; Franck eGiacomoni
    Published in: Frontiers in Molecular Biosciences, Vol 3 (2016), issue 3, 2016.  ISSN: 2296-889X
    DOI: 10.3389/fmolb.2016.00002

Koordinator

EUROPEAN MOLECULAR BIOLOGY LABORATORY
Germany

EU-Beitrag: EUR 1 923 255


Meyerhofstrasse 1
69117 HEIDELBERG
Germany
Activity type: Private for-profit entities (excluding Higher or Secondary Education Establishments)

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Teilnehmer

IMPERIAL COLLEGE OF SCIENCE TECHNOLOGY AND MEDICINE
United Kingdom

EU-Beitrag: EUR 1 232 095


SOUTH KENSINGTON CAMPUS EXHIBITION ROAD
SW7 2AZ LONDON
United Kingdom
Activity type: Higher or Secondary Education Establishments

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LEIBNIZ-INSTITUT FUR PFLANZENBIOCHEMIE
Germany

EU-Beitrag: EUR 632 500


Weinberg 3
06120 Halle
Germany
Activity type: Research Organisations

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UNIVERSITAT DE BARCELONA
Spain

EU-Beitrag: EUR 365 937,50


GRAN VIA DE LES CORTS CATALANES 585
08007 BARCELONA
Spain
Activity type: Higher or Secondary Education Establishments

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THE UNIVERSITY OF BIRMINGHAM
United Kingdom

EU-Beitrag: EUR 280 376,25


Edgbaston
B15 2TT BIRMINGHAM
United Kingdom
Activity type: Higher or Secondary Education Establishments

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CONSORZIO INTERUNIVERSITARIO RISONANZE MAGNETICHE DI METALLO PROTEINE
Italy

EU-Beitrag: EUR 225 750


PIAZZA SAN MARCO 4
50121 FIRENZE
Italy
Activity type: Higher or Secondary Education Establishments

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UNIVERSITEIT LEIDEN
Netherlands

EU-Beitrag: EUR 528 930


RAPENBURG 70
2311 LEIDEN
Netherlands
Activity type: Higher or Secondary Education Establishments

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THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD
United Kingdom

EU-Beitrag: EUR 777 761,25


WELLINGTON SQUARE UNIVERSITY OFFICES
0012 OXFORD
United Kingdom
Activity type: Higher or Secondary Education Establishments
Administrative Kontaktangaben: Linda Polik
Tel.: +44 1865 289811
Fax: +44 1865 289801

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UPPSALA UNIVERSITET
Sweden

EU-Beitrag: EUR 916 655


VON KRAEMERS ALLE 4
751 05 UPPSALA
Sweden
Activity type: Higher or Secondary Education Establishments

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BIOBANKS AND BIOMOLECULAR RESOURCES RESEARCH INFRASTRUCTURE CONSORTIUM (BBMRI-ERIC)
Austria

EU-Beitrag: EUR 15 875


NEUE STIFTINGTALSTRASSE 2/B/6
8010 GRAZ
Austria
Activity type: Research Organisations

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COMMISSARIAT A L ENERGIE ATOMIQUE ET AUX ENERGIES ALTERNATIVES
France

EU-Beitrag: EUR 392 563,75


RUE LEBLANC 25
75015 PARIS 15
France
Activity type: Research Organisations

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INSTITUT NATIONAL DE LA RECHERCHE AGRONOMIQUE
France

EU-Beitrag: EUR 276 833,75


Rue De L'Universite 147
75338 PARIS CEDEX 07
France
Activity type: Research Organisations

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SIB INSTITUT SUISSE DE BIOINFORMATIQUE
Switzerland

EU-Beitrag: EUR 0


RUE MICHEL SERVET 1 CMU
1206 GENEVE
Switzerland
Activity type: Research Organisations

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CENTRO DI RICERCA SVILUPPO E STUDI SUPERIORI IN SARDEGNA SOCIETA' A RESPONSABILITA' LIMITATA
Italy

EU-Beitrag: EUR 129 201,25


LOCALITA PISCINA MANNA EDIFICIO 1
09010 PULA CAGLIARI
Italy
Activity type: Research Organisations

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