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Evolution of Regulatory Landscapes in Chordates

Objective

Evolution of animal forms largely depends on changes in developmental gene expression patterns. These genes are controlled by a large number of cis-regulatory elements (CREs) distributed in extended genomic regions organized in 3D chromatin structures known as regulatory landscapes (RLs). However, it is currently unknown how these RLs originate and evolve and how changes in RL architecture and associated CREs have impacted the evolution of gene expression and animal body plans. The aim of this proposal is to understand the evolution and origin of vertebrate regulatory genomic architecture. For that, I will generate an extensive epigenetic and topological profiling of the European amphioxus genome, a slow-evolving basal invertebrate chordate. I will study RLs 3D chromatin architecture, enhancers, promoters, open chromatin and nucleosome positioning through amphioxus embryogenesis using 4C-seq, ChIP-seq, ATAC-seq and RNA-seq and compare these datasets with equivalent results from vertebrates. This will allow me to identify the core RLs organizations that we and other vertebrates share and that underlie the novel and conserved features that characterize our body plan. These results will make ground breaking advances in our understanding of how the regulatory architecture of our genome was assembled during evolution, providing new insights on how RLs organization has impacted gene expression and, ultimately, evolution of animal morphology. By the execution of EVOREL innovative techniques and multi-disciplinary approaches to unveil the deep roots of the human regulatory architecture, I will start a promising research program that will secure my future career as an independent group leader.

Fields of science (EuroSciVoc)

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Programme(s)

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Topic(s)

Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.

Funding Scheme

Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.

MSCA-IF-EF-ST - Standard EF

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Call for proposal

Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.

(opens in new window) H2020-MSCA-IF-2014

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Coordinator

AGENCIA ESTATAL CONSEJO SUPERIOR DE INVESTIGACIONES CIENTIFICAS
Net EU contribution

Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.

€ 158 121,60
Address
CALLE SERRANO 117
28006 MADRID
Spain

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Region
Comunidad de Madrid Comunidad de Madrid Madrid
Activity type
Research Organisations
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Total cost

The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.

€ 158 121,60
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