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Content archived on 2024-04-19

Plasmodial genome: structure and dynamics

Objective



Genetic variability of malaria parasites represents a major obstacle to control strategies based either on therapy or on prevention. Emergence of drug-resistant forms already limits the usefulness of existing drugs, and selection of antigenic variants may rapidly nullify the action of newly developed vaccines. Variability is not only recorded among different geographical isolates, but also over time in the course of individual infections. The ability to change its own genetic make-up in response to different kinds of pressures most likely confers a selective advantage to the parasite. Genome studies are of fundamental importance in order to understand the nature of variation, which might take place both by gene mutation and recombination mechanisms and through genomic rearrangements. Accordingly, the project intends to study genome structure and dynamics at different levels, and to integrate information obtained with different methodologies. Population genetics studies on natural P.falciparum populations will provide important data, and possibly models, for the spread of defined genetic characters (eg. drug resistance). Defining patterns of allelic segregation in the progeny of a single meiotic event will help clarify the mechanism of meiotic recombination in the organism and its importance in natural interbreeding populations. The remarkable genomic polymorphism observed in molecular karyotypes in the course of mitotic multiplication will be studied by mapping the size variations to specific chromosomal regions. This might facilitate localisation of particular functions by deletion mapping. Finally, the dynamics of mobile elements and their possible role in the process of genomic diversification will be studied. The following lines will be activated:
1- Genetic polymorphism in natural P. falciparum populations. 1.1.a) Frequency of cross-fertilization in natural populations. 1.1.b) Frequency of recombination in single hybrid oocysts.
1.2 Spatial scale of P. falciparum populations.

1.3 Diversity of S-anti gen alleles Within an endemic area.
2- Karyotype polymorphism. 2.1. Technical improvements.
2.2 Deletion mapping of dispensable functions.
2.3 Subtelomeric structures and genes.

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Coordinator

UNIVERSITY OF EDINBURGH
EU contribution
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Address
West Mains Road, Ashworth Laboratories, King's Bu
EH9 3JT EDINBURGH
United Kingdom

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Total cost

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Participants (4)

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