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Content archived on 2024-05-27

Antibacterial lead discovery with D/L-peptide libraries

Objective

Nowadays, a multitude of examples for targeting enzymes with small molecules is known, whereas the direkt access to macromolecular interaction, such as DNA/protein, RNA/protein and protein/protein within the cell still waits to be solved by generic methods. We intend to create a toolbox for targeting these interactions with D-/L-peptides, a new class of biostable oligomer ligands. Initially we will establish split-and-pool libraries using postsynthetic dimerization of two orthogonal pairing partners which can be expected to form stable folds of the size of interactive protein subdomains. In a second approach, specific target functions and interaction domains will be used to generate new ligands by design and structural analogy. Folding and secondary structure preference of the most potent constructs will be elucidated (CD, NMR, FRET) to deduce preferences for pairing, minimal sequence length, and composition. Macromolecular targets and activity will be further studied using fluorescence microscopy and protein binding assays.

Fields of science (EuroSciVoc)

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Keywords

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Topic(s)

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Call for proposal

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FP7-PEOPLE-IEF-2008
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Funding Scheme

Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.

MC-IEF - Intra-European Fellowships (IEF)

Coordinator

MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV
EU contribution
€ 127 813,76
Address
HOFGARTENSTRASSE 8
80539 MUNCHEN
Germany

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Region
Bayern Oberbayern München, Kreisfreie Stadt
Activity type
Research Organisations
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Total cost

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