Objective
Systems biology is a new and rapidly growing discipline. It is widely believed to have a broad transformative potential on both basic and applied studies in the life sciences. In particular, metabolic network reconstructions are playing a key role as they provide a framework for investigation of the mechanism underlying the genotype-phenotype relationship. Pseudomonas aeruginosa is an opportunistic pathogen of clinical relevance with an increasing resistance against available antibiotics, which is partially attributed to its ability to form biofilms. The proposed project will construct a comprehensive biofilm model of P. aeruginosa using a recently published metabolic reconstruction. The biofilm model will represent typical micro-habitats. Hence, it will give insight into distinct metabolic difference of planktonic and biofilm-associated bacteria and may further our understanding as to why biofilm bacteria are resistant to antibiotics. Metabolomic, patient samples will be integrated with the biofilm model which is expected to yield insight into conditions associated with disease progression and manifestation. The biofilm model will also be employed to predict new strategies for therapeutic interventions through in silico gene deletion studies. The project will include the development of relevant reconstruction and analysis methods. This work will set new standards in reconstruction, analysis, and modeling techniques and will build the first large-scale bacterial-community-based network. Gained knowledge will be directly applicable to other single or multi-species bacterial communities. The proposed project will be carried out within the Center for Systems Biology at the University of Iceland. Lastly, the project is well placed within the recent European efforts to apply systems biological approaches towards improving early diagnosis and accelerating the discovery of novel interventions.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: https://op.europa.eu/en/web/eu-vocabularies/euroscivoc.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: https://op.europa.eu/en/web/eu-vocabularies/euroscivoc.
- natural sciences biological sciences microbiology bacteriology
- medical and health sciences basic medicine pharmacology and pharmacy pharmaceutical drugs antibiotics
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Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
FP7-PEOPLE-2009-RG
See other projects for this call
Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Coordinator
101 Reykjavik
Iceland
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.