Deliverables 3.1 Identification of auxin responsive promoters in poplar by PCR walking Promoter sequences have been isolated from Poplar by PCR-walk. They correspond to the promoters of auxin-regulated genes as PttIAA1, PttIAA3, PttparA and PttarcA. Plant expression vectors containing these promoter domains upstream the reporter gene UidA are available. Expression patterns of these constructs have been studied in the model plant Arabidopsis. Homozygous lines for each construct are also available as tissue specific marker lines. These promoters are also available to control gene expression in targeted tissues. 6.1 Methods for evaluation of poplar wood For selection of plant material for tree improvement, both growth and material properties have to be considered. Poplar wood is a good raw material for pulp and paper. Its fibres have suitable dimensions to form a smooth paper surface with good optical properties, but it also contains vessels, which may create problems at printing. Research in wood and fibres has been limited by lack of efficient measurement methods. STFI has developed several methods useful for evaluation of the industrial potential of softwoods. One task within of the project has been to establish a set of characterization methods, useful in tree improvement programs for evaluation of properties of young hardwood materials. This includes investigation of age-to-age relationships, based on measurements of property differences between individual growth rings. Measurements of length and width of fibres and vessel elements in poplar have been emphasized. Prior to the project, STFI had developed a system, STFI FiberMaster, for characterization of fibers in pulp, primarily softwood fibers. The method had also been used for analysis of the radial development of the fiber length in stem cross-sections. Cross-sections were cut into radial sub-samples. The fibers were liberated through maceration and analysed. The same procedure has now been tested on poplar, with positive results. To allow the study of sub-samples representing individual growth rings, a new procedure has been developed: Radial sample strips are cut from larger-size wood samples and the growth rings to be analyzed are marked out. Sample strips are placed in especially designed containers and a kraft cook is performed. After cooking, the strips are soft but intact. The marked out growth rings are removed and the material is agitated to liberate the fibers, vessel elements, etc. With the FiberMaster, it was not possible to analyse the vessel elements in the pulp. A new method for this has been developed in parallel with and inspired by the POPWOOD project. Pulp is diluted and images are recorded from its different objects: fibers, vessel elements, fines, etc. Image analysis is applied to locate the individual objects, classify them by type and collect the objects of each type in separate files. The objects are then characterized with dedicated routines. When ¡§minority objects¡¨ are characterized, it may happen that too few objects for good statistics are analysed. Routines have been added to handle this and good measurement results are now obtained. In many cases it is, however, interesting to measure on the objects in situ in the original wood matrix, to allow a better interpretation of the result. In the POPWOOD project, a new technique has been developed for this. The cross-sectional dimensions of individual fibres and vessel elements are analysed with microscopy over large areas in wood (mm x cm). A solid wood sample is sawn from the wood material. The sample is planed, sanded and prepared to offer an even surface with high contrast between the fibre wall and lumen. The sample is mounted on a motorized stage under a microscope equipped with a video camera. The set-up is operated by a computer control system. Many small, elementary images are taken and stitched together into larger images. Image analysis is applied to identify each object (fibres and vessels) and to determine features such as widths, perimeter, area, roundness. A functioning system has been built. There were difficulties with the image quality, which were to a large extent solved by using of microtome sliced samples instead of solid wood. There were also difficulties with long calculation times. Eventually, it was decided that the method for measurement on pulp would be used when large numbers of poplar samples would be analysed. However, many experiences valuable also in other measurement applications have been gained and will be reported. The evaluation of age-to age-relationships of different plant materials (result 19795) has, thus, been performed with the new methods for production of growth ring pulp samples and for analysis of fibers and vessel elements in pulp, with good results. Large interest has been shown from industry and researchers. The methods are already applied in other research projects and contract work on aspen and eucalyptus. In one project, the natural variability within and between trees and clones is investigated for better matching of wood raw materials and products. In other projects the objectives are to select suitable clones for plantation forests. Other possible applications are trouble-shooting in mills, if problems related to vessel elements or other raw material properties are suspected, process investigations and optimisation. The new procedures are now in operation in the STFI Wood and Fiber Measurement and Simulation Laboratory. Extensive use is expected in own research, R&D co-operations and contract work with research groups and companies. 4.3 Molecular cloning of poplar genes involved in Vascular development Based on the transcript profiling experiment described under section 4787, a selected number of genes have been chosen for functional analysis in poplar. We have preferentially chosen genes with a distinct peak of expression in the central part of the vascular cambium. We have from this set of peak genes filtered out genes that only has high expression in the cambium and not in the other meristems of the plant, this to ensure that we enrich for cambium specific genes. The final group of 78 genes have been subjected to RNA interference in poplar. The creation of transgenic poplar with downregulation of these genes was initiated in February. 2003 and we are expecting to score the phenotypes in June-September 2004. In parallel, 14 of these genes has been selected for full length cloning and has been transformed into poplar under both a cambium specific promoter and inducible promoter. Searching for OpenAIRE data... There was an error trying to search data from OpenAIRE No results available
