INNOVATIVE EPIGENETIC MARKERS FOR FISH DOMESTICATION

Changes of fast muscle cellularity in male and female Nile tilapia (Oreochromis niloticus) over three generations of domestication

Auteurs: Ramsha Iqbal, Jorge Fernandes, Marit Bjørnevik, Jorge Galindo-Villegas
Publié dans: 2023
Éditeur: Nord University

Exploring epigenetic resistance to infectious salmon anaemia in Atlantic salmon by genome-wide bisulfite sequencing in heart tissue

Auteurs: Hans Ekvall, Jorge Fernandes, Ioannis Konstantinidis, Øivind Andersen, Jens Tetens
Publié dans: 2021
Éditeur: NMBU

DNA hydroxymethylation and improved growth of Nile tilapia (Oreochromis niloticus) during domestication

Auteurs: Ioannis Konstantinidis, Jorge Fernandes, Pål Sætrom
Publié dans: PhD in Aquatic Biosciences, 2020, ISBN 978-82-93165-36-1
Éditeur: Nord University

Circulating miRNAs as potential non-invasive biomarkers of growth in Nile tilapia (Oreochromis niloticus)

Auteurs: Alex Wardale, Jorge Fernandes
Publié dans: 2019
Éditeur: Nord University

Growth associated DNA methylation and hydroxymethylation profiles of the Nile tilapia (Oreochromis niloticus) pituitary uncover potential epigenetic markers

Auteurs: Hans Ekvall, Jorge Fernandes
Publié dans: 2018
Éditeur: Nord University

Nanoencapsulated clove oil applied as an anaesthetic at slaughtering decreases stress, extends the freshness, and lengthens shelf life of cultured fish

Auteurs: Amanda Esperanza López-Cánovas, Isabel Cabas, Elena Chaves-Pozo, María Ros-Chumillas, Laura Navarro-Segura, Antonio López-Gómez, Jorge M. O. Fernandes, Jorge Galindo-Villegas, Alfonsa García-Ayala
Publié dans: Foods, Numéro 9, 2020, Page(s) 1750, ISSN 2304-8158
Éditeur: MDPI
DOI: 10.3390/foods9121750

Intergenerational transfer of persistent bacterial communities in female Nile tilapia

Auteurs: Yousri Abdelhafiz, Jorge Fernandes, Claudio Donati, Massimo Pindo, Viswanath Kiron
Publié dans: Frontiers in Microbiology, Numéro 1664302X, 2022, ISSN 1664-302X
Éditeur: Frontiers Media
DOI: 10.3389/fmicb.2022.879990

Early fish domestication affects methylation of key genes involved in the rapid onset of the farmed phenotype

Auteurs: Tomasz Podgorniak; Anusha Dhanasiri; Xianquan Chen; Xu Ren; Pei-Fen Kuan; Jorge Fernandes
Publié dans: Epigenetics, Numéro 15592294, 2022, ISSN 1559-2294
Éditeur: Landes Bioscience
DOI: 10.1080/15592294.2021.2017554

Integration of morphometrics and machine learning enables accurate distinction between wild and farmed common carp

Auteurs: Omid Jafari; Mansour Ebrahimi; Seyed Ali-Akbar Hedayati; Mehrshad Zeinalabedini; Hadi Poorbagher; Maryam Nasrolahpourmoghadam; Jorge M. O. Fernandes
Publié dans: Life, Numéro 20751729, 2022, ISSN 2075-1729
Éditeur: MDPI
DOI: 10.3390/life12070957

Breeding strategy shapes the composition of bacterial communities in female Nile tilapia reared in a recirculating aquaculture system

Auteurs: Yousri Abdelhafiz, Jorge Fernandes, Simone Larger, Davide Albanese, Claudio Donati, Omid Jafari, Artem Nedoluzhko, Viswanath Kiron
Publié dans: Frontiers in Microbiology, Numéro 1664302X, 2021, ISSN 1664-302X
Éditeur: Frontiers Media
DOI: 10.3389/fmicb.2021.709611

Function of Circular RNAs in Fish and Their Potential Application as Biomarkers

Auteurs: Golam Rbbani, Artem Nedoluzhko, Jorge Galindo-Villegas, Jorge M. O. Fernandes
Publié dans: International Journal of Molecular Sciences, Numéro 22/13, 2021, Page(s) 7119, ISSN 1422-0067
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms22137119

Differences in the fast muscle methylome provide insight into sex-specific epigenetic regulation of growth in Nile tilapia during early stages of domestication

Auteurs: Tomasz Podgorniak, Sven Brockmann, Ioannis Konstantinidis, Jorge M. O. Fernandes
Publié dans: Epigenetics, Numéro 14, 2019, Page(s) 1-19, ISSN 1559-2294
Éditeur: Landes Bioscience
DOI: 10.1080/15592294.2019.1618164

CircParser: a novel streamlined pipeline for circular RNA structure and host gene prediction in non-model organisms

Auteurs: Artem Nedoluzhko, Fedor Sharko, Md. Golam Rbbani, Anton Teslyuk, Ioannis Konstantinidis, Jorge M.O. Fernandes
Publié dans: PeerJ, Numéro 8, 2020, Page(s) e8757, ISSN 2167-8359
Éditeur: PeerJ
DOI: 10.7717/peerj.8757

Major gene expression changes and epigenetic remodelling in Nile tilapia muscle after just one generation of domestication

Auteurs: Ioannis Konstantinidis, Pål Sætrom, Robin Mjelle, Artem V. Nedoluzhko, Diego Robledo, Jorge M. O. Fernandes
Publié dans: Epigenetics, 2020, Page(s) 1-16, ISSN 1559-2294
Éditeur: Landes Bioscience
DOI: 10.1080/15592294.2020.1748914

A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breeds

Auteurs: Artem V. Nedoluzhko, Natalia V. Slobodova, Fedor Sharko, Gulmira M. Shalgimbayeva, Svetlana V. Tsygankova, Eugenia S. Boulygina, Zsigmond Jeney, Van Q. Nguyen, Thế T. Pham, Đức T. Nguyen, Alexander A. Volkov, Jorge M.O. Fernandes, Sergey M. Rastorguev
Publié dans: Ecology and Evolution, Numéro 10/12, 2020, Page(s) 5431-5439, ISSN 2045-7758
Éditeur: John Wiley and Sons Ltd
DOI: 10.1002/ece3.6286

Genome-wide hydroxymethylation profiles in liver of female Nile tilapia with distinct growth performance

Auteurs: Ioannis Konstantinidis, Pål Sætrom, Jorge Fernandes
Publié dans: Scientific Data, Numéro 10, 2023, Page(s) 114, ISSN 2052-4463
Éditeur: Springer Nature
DOI: 10.1038/s41597-023-01996-5

Kisspeptin Influences the Reproductive Axis and Circulating Levels of microRNAs in Senegalese Sole

Auteurs: Catarina C. V. Oliveira, Elvira Fatsini, Ignacio Fernández, Catarina Anjos, François Chauvigné, Joan Cerdà, Robin Mjelle, Jorge M. O. Fernandes, Elsa Cabrita
Publié dans: International Journal of Molecular Sciences, Numéro 21/23, 2020, Page(s) 9051, ISSN 1422-0067
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms21239051

Phytogenic bioactive compounds shape fish mucosal immunity

Auteurs: Jorge Galindo-Villegas, Joana Firmino, Felipe Reyes-López, Enric Gisbert
Publié dans: Frontiers in Immunology, Numéro 16643224, 2021, ISSN 1664-3224
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fimmu.2021.695973

Power Play of Commensal Bacteria in the Buccal Cavity of Female Nile Tilapia

Auteurs: Yousri Abdelhafiz; Jorge M.O. Fernandes; Erika Stefani; Davide Albanese; Claudio Donati; Viswanath Kiron
Publié dans: Frontiers in Microbiology, Numéro 1664302X, 2021, ISSN 1664-302X
Éditeur: Frontiers Media
DOI: 10.3389/fmicb.2021.773351

Population genomics of introduced Nile tilapia Oreochromis niloticus (Linnaeus, 1758) in the Democratic Republic of the Congo: Repeated introductions since colonial times with multiple sources

Auteurs: Mare Geraerts,Carl Vangestel,Tom Artois, Jorge Fernandes, Michiel Jorissen, Auguste Manda, Célestin Mizani, Karen Smeets, Jos Snoeks, Gontran Sonet, Yang Tingbao, Maarten Van Steenberge, Emmanuel Vreven, Soleil Wamuini, Maarten Vanhove,Tine Huyse
Publié dans: Molecular Ecology, Numéro 1365294X, 2022, Page(s) 3304-3322, ISSN 1365-294X
Éditeur: John Wiley & Sons Ltd
DOI: 10.1111/mec.16479

The first mitochondrial 5-methylcytosine map in a non-model teleost (Oreochromis niloticus) reveals extensive strand-specific and non-CpG methylation

Auteurs: Artem Nedoluzhko, Robin Mjelle, Maria Renström, Kaja H. Skjærven, Francesc Piferrer, Jorge M.O. Fernandes
Publié dans: Genomics, 2021, ISSN 0888-7543
Éditeur: Academic Press
DOI: 10.1016/j.ygeno.2021.07.007

Epigenetic mapping of the somatotropic axis in Nile tilapia reveals differential DNA hydroxymethylation marks associated with growth

Auteurs: Ioannis Konstantinidis, Dafni Anastasiadi, Pål Sætrom, Artem V. Nedoluzhko, Robin Mjelle, Tomasz Podgorniak, Francesc Piferrer, Jorge M.O. Fernandes
Publié dans: Genomics, Numéro 113/5, 2021, Page(s) 2953-2964, ISSN 0888-7543
Éditeur: Academic Press
DOI: 10.1016/j.ygeno.2021.06.037

Non-coding RNAs in fish physiology and development: miRNAs as a cornerstone in gene networks

Auteurs: Francisco Toledo-Solís, Jorge Fernandes, Elena Sarropoulou, Ignacio Fernández
Publié dans: Cellular and Molecular Approaches in Fish Biology, 2021, Page(s) 105-160, ISBN 9780128222744
Éditeur: Academic Press/ Elsevier

GIA2018: 5th International Symposium on Genomics in Aquaculture

Auteurs: Jorge Fernandes, Elena Sarropoulou, Viswanath Kiron, Deborah Power, John Liu
Publié dans: Genomics in Aquaculture, 2018
Éditeur: CCWP Events Lda

Cellular and Molecular Approaches in Fish Biology

Auteurs: Ignacio Fernandez, Jorge Fernandes
Publié dans: 2021, ISBN 9780128222744
Éditeur: Academic Press/ Elsevier

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