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In vitro and In-cell characterization of Quadruplex-duplex hybrids: conformation, folding, and recognition by drug-like ligand molecule

Project description

Characterisation of nucleic acid quadruplex−duplex hybrids and their targeting by drug-like ligands

Nucleic acids are polymorphic, and guanine-rich nucleic acid sequences can form G-quadruplex (G4) structures in addition to classic duplexes. The formation of G4 structures was shown in vitro in solutions and cells, where they presented attractive targets for small molecules. Recent studies suggest that G4 folding may differ in the cellular environment due to the limitation of the components. Funded by the Marie Skłodowska-Curie Actions programme, the QDHassay project aims to develop specific G4 drugs targeting G4 quadruplex−duplex hybrids (QDH). The project will use low- and high-resolution spectroscopy as well as ligand screening based on mass spectrometry to characterise ligand−QDH interaction. The final goal is to develop an in-cell nucleic acid folding spectroscopy analysis method and a ligand screening assay inside the cellular system.

Funding Scheme

MSCA-PF - MSCA-PF

Coordinator

Masarykova univerzita
Net EU contribution
€ 166 278,72
Address
Zerotinovo Namesti 9
601 77 Brno
Czechia

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Region
Jihovýchod Jihomoravský kraj
Activity type
Higher or Secondary Education Establishments
Other funding
No data

Partners (1)

JOHANN WOLFGANG GOETHE-UNIVERSITAET FRANKFURT AM MAIN
Germany
Net EU contribution
€ 0,00
Address
Theodor W Adorno Platz 1
60323 Frankfurt Am Main

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Region
Baden-Württemberg Stuttgart Stuttgart, Stadtkreis
Activity type
Higher or Secondary Education Establishments
Other funding
No data