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HOGENOM

In the framework of the Integr8 project, we have developed a database of homologous genes dedicated to the comparative analysis of completely sequenced genomes: HOGENOM. The HOGENOM database is directly based on the sequence data from UniProt, and notably on the Genome Review section, that provides a coherent and non-redundant collection of proteins from complete genomes.

Homologous protein genes are classified into families on the basis of BLAST similarity searches between protein sequences and, for each family, a multiple alignment and a phylogenetic tree are computed.

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LABORATOIRE DE BIOMETRIE
43 BOULEVARD DU 11 NOVEMBRE 1918
69622 VILLEURBANNE CEDEX
France
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