Skip to main content
Go to the home page of the European Commission (opens in new window)
English English
CORDIS - EU research results
CORDIS
Content archived on 2024-06-16

Combined genetic and functional genomic approaches for stress and disease resistance marker assisted selection in fish and shellfish

Objective

The overall aim of this project is to identify genes associated with stress and disease resitance in oyster, trout, sea bream, and sea bass in order to provide a physiological and genetic basis for marker-assisted selection. These studies will be carried o ut for fish using stress and pathogen challenges directly relevant to aquaculture and for oyster using environmental conditions that are known to lead to significant summer mortalities. In Part 1 of the project the genes involved in the functional response to stress or pathogen exposure will be identified. This will be carried out in the four species by (i) constructing relevant EST collections using SSH cDNA libraries which will be spotted on microarrays, followed by (ii) analysis of gene expression profil es in various tissues of animals exposed to stressors or pathogens. This analysis will be also carried out in families that are divergent for stress response or disease resistance (fish) or for summer survival (oyster). In order to investigate relationship between potential candidate genes and QTL for these traits, Part 2 of the project will identify Single Nucleotide Polymorphisms (SNP) in these candidate genes in oyster and trout. This polymorphism will be analysed both in the EST sequences and in the pro moter region. In Part 3 of the project QTL analysis will be used to identify genes that are associated with stress specific traits and disease resistance traits using previously characterized SNP and also microsatellites markers. We will also carry out map ping of these genes in linkage and gene maps.Part 4 is devoted to outline operational genetic protocols incorporating identified QTL and traditional breeding approaches in oyster, sea bream and sea bass. This knowledge will be transferred to the industry t hrough organisation of workshops gathering scientists and RTD performers.

Fields of science (EuroSciVoc)

CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.

You need to log in or register to use this function

Keywords

Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)

Programme(s)

Multi-annual funding programmes that define the EU’s priorities for research and innovation.

Topic(s)

Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.

Call for proposal

Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.

FP6-2003-SSP-3
See other projects for this call

Funding Scheme

Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.

NoE - Network of Excellence

Coordinator

INSTITUT NATIONAL DE LA RECHERCHE AGRONOMIQUE
EU contribution
No data
Total cost

The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.

No data

Participants (16)

My booklet 0 0