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Association of European Marine Biological Laboratories Expanded

Deliverables

Guidelines for standardization of DNA metabarcoding

Guidelines for standardization of DNA metabarcoding

strategy document for establishment of European GO network

strategy document for establishment of European GO network

Risk management plan

Risk management plan

TA-policy document

TA-policy document

Communication and dissemination plan

Communication and dissemination plan

2nd data management plan

2nd data management plan

1st Data management plan

Data management plan

3rd annual access report for the TA programme

3rd annual access report for the TA programme

3rd-year assessment report by international review panel

3rd-year assessment report by international review panel

Protocols for genetic transformation of model organisms

Protocols for genetic transformation of model organisms

Report on RI capacity in value creation, impact and engagement

Report on RI capacity in value creation, impact and engagement

1st annual access report for the TA programme

1st annual access report for the TA programme

3rd year access report on VA-users

3rd year access report on VA-users

Protocols for the deployment of CRISPR/Cas9 system

Protocols for the deployment of CRISPR/Cas9 system

2nd annual access report for the TA programme

2nd annual access report for the TA programme

kick-off meeting minutes

kick-off meeting minutes

project website and video

project website and video

Depository of current methodology and discussion forum portal

Depository of current methodology and discussion forum portal

GO data delivered for VA

GO data delivered for VA

"outreach book ""history of marine biological stations"""

"outreach book ""history of marine biological stations"""

Tool-box of methodology and discussion forum portal

Tool-box of methodology and discussion forum portal

1st Virtual access hits to ASSEMBLE plus data resources

Virtual access hits to ASSEMBLE plus data resources

Publications

Nicotine Induces Polyspermy in Sea Urchin Eggs through a Non-Cholinergic Pathway Modulating Actin Dynamics

Author(s): Nunzia Limatola, Filip Vasilev, Luigia Santella, Jong Tai Chun
Published in: Cells, 9/1, 2020, Page(s) 63, ISSN 2073-4409
Publisher: Cells
DOI: 10.3390/cells9010063

Cryopreservation Of Clams For Conservation Of Threatened Fishing Resources

Author(s): Pablo Heres, Jesus Troncoso, Estefania Paredes
Published in: Cryobiology, 91, 2019, Page(s) 186-187, ISSN 0011-2240
Publisher: Academic Press
DOI: 10.1016/j.cryobiol.2019.10.158

A G protein–coupled receptor mediates neuropeptide-induced oocyte maturation in the jellyfish Clytia

Author(s): Gonzalo Quiroga Artigas, Pascal Lapébie, Lucas Leclère, Philipp Bauknecht, Julie Uveira, Sandra Chevalier, Gáspár Jékely, Tsuyoshi Momose, Evelyn Houliston
Published in: PLOS Biology, 18/3, 2020, Page(s) e3000614, ISSN 1545-7885
Publisher: PLOS Biology
DOI: 10.1371/journal.pbio.3000614

Adult moulting and dimorphism in a new species of Sphenoderes (Kinorhyncha: Kentrorhagata)—Is the exception becoming the rule?

Author(s): Martin V. Sørensen, Maria Herranz
Published in: Acta Zoologica, 2020, ISSN 0001-7272
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/azo.12361

Altered actin cytoskeleton in ageing eggs of starfish affects fertilization process

Author(s): Nunzia Limatola, Filip Vasilev, Jong Tai Chun, Luigia Santella
Published in: Experimental Cell Research, 381/2, 2019, Page(s) 179-190, ISSN 0014-4827
Publisher: Academic Press
DOI: 10.1016/j.yexcr.2019.05.007

Microplastic retention by marine vegetated canopies: Simulations with seagrass meadows in a hydraulic flume

Author(s): Carmen B. de los Santos, Anna-Sara Krång, Eduardo Infantes
Published in: Environmental Pollution, 2020, Page(s) 116050, ISSN 0269-7491
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.envpol.2020.116050

Science, Diplomacy, and the Red Sea’s Unique Coral Reef: It’s Time for Action

Author(s): Karine Kleinhaus, Ali Al-Sawalmih, Daniel J. Barshis, Amatzia Genin, Lola N. Grace, Ove Hoegh-Guldberg, Yossi Loya, Anders Meibom, Eslam O. Osman, Jean-Daniel Ruch, Yonathan Shaked, Christian R. Voolstra, Assaf Zvuloni, Maoz Fine
Published in: Frontiers in Marine Science, 7, 2020, ISSN 2296-7745
Publisher: Front. Mar. Sci.
DOI: 10.3389/fmars.2020.00090

Non-lethal effects of the predator Meganyctiphanes norvegica and influence of seasonal photoperiod and food availability on the diel feeding behaviour of the copepod Centropages typicus

Author(s): Manuel Olivares, Peter Tiselius, Albert Calbet, Enric Saiz
Published in: Journal of Plankton Research, 2020, ISSN 0142-7873
Publisher: Oxford University Press
DOI: 10.1093/plankt/fbaa051

Trans-Atlantic Distribution and Introgression as Inferred from Single Nucleotide Polymorphism: Mussels Mytilus and Environmental Factors

Author(s): Roman Wenne, Małgorzata Zbawicka, Lis Bach, Petr Strelkov, Mikhail Gantsevich, Piotr Kukliński, Tomasz Kijewski, John H. McDonald, Kristil Kindem Sundsaasen, Mariann Árnyasi, Sigbjørn Lien, Ants Kaasik, Kristjan Herkül, Jonne Kotta
Published in: Genes, 11/5, 2020, Page(s) 530, ISSN 2073-4425
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes11050530

Mineral formation in the primary polyps of pocilloporoid corals

Author(s): Maayan Neder, Pierre Philippe Laissue, Anat Akiva, Derya Akkaynak, Marie Albéric, Oliver Spaeker, Yael Politi, Iddo Pinkas, Tali Mass
Published in: Acta Biomaterialia, 96, 2019, Page(s) 631-645, ISSN 1742-7061
Publisher: Elsevier BV
DOI: 10.1016/j.actbio.2019.07.016

Long term survival of cryopreserved mussel larvae (Mytilus galloprovinciallis)

Author(s): R. Rodriguez-Riveiro, P. Heres, J. Troncoso, E. Paredes
Published in: Aquaculture, 512, 2019, Page(s) 734326, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2019.734326

Electric ultrafreezer (− 150 °C) as an alternative for zebrafish sperm cryopreservation and storage

Author(s): Patrícia Diogo, Gil Martins, Isa Quinzico, Rita Nogueira, Paulo J. Gavaia, Elsa Cabrita
Published in: Fish Physiology and Biochemistry, 44/6, 2018, Page(s) 1443-1455, ISSN 0920-1742
Publisher: Kluwer Academic Publishers
DOI: 10.1007/s10695-018-0500-6

A Marine Biodiversity Observation Network for Genetic Monitoring of Hard-Bottom Communities (ARMS-MBON)

Author(s): Matthias Obst, Katrina Exter, A. Louise Allcock, Christos Arvanitidis, Alizz Axberg, Maria Bustamante, Ibon Cancio, Diego Carreira-Flores, Eva Chatzinikolaou, Giorgos Chatzigeorgiou, Nathan Chrismas, Melody S. Clark, Thierry Comtet, Thanos Dailianis, Neil Davies, Klaas Deneudt, Oihane Diaz de Cerio, Ana Fortič, Vasilis Gerovasileiou, Pascal I. Hablützel, Kleoniki Keklikoglou, Georgios Kotoulas,
Published in: Frontiers in Marine Science, 7, 2020, ISSN 2296-7745
Publisher: Ocean Observation
DOI: 10.3389/fmars.2020.572680

The Diversity of Muscles and Their Regenerative Potential across Animals

Author(s): Letizia Zullo, Matteo Bozzo, Alon Daya, Alessio Di Clemente, Francesco Paolo Mancini, Aram Megighian, Nir Nesher, Eric Röttinger, Tal Shomrat, Stefano Tiozzo, Alberto Zullo, Simona Candiani
Published in: Cells, 9/9, 2020, Page(s) 1925, ISSN 2073-4409
Publisher: Cells
DOI: 10.3390/cells9091925

Identification to species level of live single microalgal cells from plankton samples with matrix-free laser/desorption ionization mass spectrometry

Author(s): Tim U. H. Baumeister, Marine Vallet, Filip Kaftan, Laure Guillou, Aleš Svatoš, Georg Pohnert
Published in: Metabolomics, 16/3, 2020, ISSN 1573-3882
Publisher: Springer Verlag
DOI: 10.1007/s11306-020-1646-7

New Alien Mediterranean Biodiversity Records (October 2020)

Author(s): MICHAIL RAGKOUSIS, NARDJES ABDELALI, ERNESTO AZZURRO, ALI BADREDDINE, MICHAEL BARICHE, GHAZI BITAR, FABIO CROCETTA, FRANCESCO DENITTO, MARKOS DIGENIS, RADHOUAN EL ZRELLI, AYŞEGÜL ERGENLER, ANA FORTIČ, VASILIS GEROVASILEIOU, SAMIR GRIMES, STELIOS KATSANEVAKIS, CENGIZ KOÇAK, CATALDO LICCHELLI, EVGENIOS LOUDAROS, FRANCESCO MASTROTOTARO, BORUT MAVRIČ, SINAN MAVRUK, ANASTASIA MILIOU, FEDERICA MONT
Published in: Mediterranean Marine Science, 2020, ISSN 1108-393X
Publisher: National Centre for Marine Research
DOI: 10.12681/mms.23673

Honey Bee Pollen in Meagre (Argyrosomus regius) Juvenile Diets: Effects on Growth, Diet Digestibility, Intestinal Traits, and Biochemical Markers Related to Health and Stress

Author(s): Simona Manuguerra; Giovanni PICCOLO; Concetta Messina; Stavros Chatzifotis; Ike Olivotto
Published in: Animals, Vol 10, Iss 2, p 231 (2020), 3, 2020, ISSN 2076-2615
Publisher: Animals
DOI: 10.3390/ani10020231

Physiological Characteristics of Stylophora pistillata Larvae Across a Depth Gradient

Author(s): Federica Scucchia, Hagai Nativ, Maayan Neder, Gretchen Goodbody-Gringley, Tali Mass
Published in: Frontiers in Marine Science, 7, 2020, ISSN 2296-7745
Publisher: Coral reef research
DOI: 10.3389/fmars.2020.00013

Comparative study on cellular and molecular responses in oyster sperm revealed different susceptibilities to cryopreservation

Author(s): Marta F. Riesco, Francisca Félix, Domitilia Matias, Sandra Joaquim, Marc Suquet, Elsa Cabrita
Published in: Aquaculture, 498, 2019, Page(s) 223-229, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2018.08.049

Contributions of suboolemmal acidic vesicles and microvilli to the intracellular Ca 2+ increase in the sea urchin eggs at fertilization

Author(s): F Vasilev, N Limatola, JT Chun, L Santella
Published in: International Journal of Biological Sciences, 15/4, 2019, Page(s) 757-775, ISSN 1449-2288
Publisher: Ivyspring International Publisher
DOI: 10.7150/ijbs.28461

Diatom Molecular Research Comes of Age: Model Species for Studying Phytoplankton Biology and Diversity

Author(s): Angela Falciatore, Marianne Jaubert, Jean-Pierre Bouly, Benjamin Bailleul, Thomas Mock
Published in: The Plant Cell, 32/3, 2020, Page(s) 547-572, ISSN 1040-4651
Publisher: American Society of Plant Biologists
DOI: 10.1105/tpc.19.00158

Does Warming Enhance the Effects of Eutrophication in the Seagrass Posidonia oceanica?

Author(s): Jessica Pazzaglia, Alex Santillán-Sarmiento, Stephanie B. Helber, Miriam Ruocco, Antonio Terlizzi, Lázaro Marín-Guirao, Gabriele Procaccini
Published in: Frontiers in Marine Science, 7, 2020, ISSN 2296-7745
Publisher: Global change and the future ocean
DOI: 10.3389/fmars.2020.564805

Density dependent grazing rates in a natural microzooplankton community

Author(s): D Calliari, L Rodríguez-Graña, P Tiselius
Published in: Marine Ecology Progress Series, 622, 2019, Page(s) 83-92, ISSN 0171-8630
Publisher: Inter-Research Science Publishing
DOI: 10.3354/meps13003

Remnants of ancestral larval eyes in an eyeless mollusk? Molecular characterization of photoreceptors in the scaphopod Antalis entalis

Author(s): Tim Wollesen, Carmel McDougall, Detlev Arendt
Published in: EvoDevo, 10/1, 2019, ISSN 2041-9139
Publisher: BioMed Central
DOI: 10.1186/s13227-019-0140-7

Underpinning the Development of Seaweed Biotechnology: Cryopreservation of Brown Algae ( Saccharina latissima ) Gametophytes

Author(s): Wouter Visch, Cecilia Rad-Menéndez, Göran M. Nylund, Henrik Pavia, Matthew J. Ryan, John Day
Published in: Biopreservation and Biobanking, 17/5, 2019, Page(s) 378-386, ISSN 1947-5535
Publisher: Mary Ann Liebert Inc.
DOI: 10.1089/bio.2018.0147

Cryopreservation of mussel trochophore larvae and long-term effects: from larval rearing to settlement.

Author(s): R. Rodríguez-Riveiro, P. Heres, E. Paredes
Published in: Cryobiology, 85, 2018, Page(s) 173-174, ISSN 0011-2240
Publisher: Academic Press
DOI: 10.1016/j.cryobiol.2018.10.206

Effects of the toxic dinoflagellate Ostreopsis cf. ovata on survival, feeding and reproduction of a phytal harpacticoid copepod

Author(s): Pavaux Anne-Sophie, Rostan Julie, Guidi-Guilvard Laurence, Marro Sophie, Ternon Eva, Olivier P. Thomas, Lemée Rodolphe, Gasparini Stéphane
Published in: Journal of Experimental Marine Biology and Ecology, 516, 2019, Page(s) 103-113, ISSN 0022-0981
Publisher: Elsevier BV
DOI: 10.1016/j.jembe.2019.05.004

The Use of Cryopreserved Biological Material for Water Quality Assessment

Author(s): Estefania Paredes, Juan Bellas
Published in: Frontiers in Marine Science, 6, 2019, ISSN 2296-7745
Publisher: Marine Pollution
DOI: 10.3389/fmars.2019.00454

Gene Editing in the Ascidian Phallusia mammillata and Tail Nerve Cord Formation

Author(s): Alex McDougall, Celine Hebras, Isa Gomes, Remi Dumollard
Published in: Developmental Biology of the Sea Urchin and Other Marine Invertebrates, 2020, ISSN 1064-3745
Publisher: Humana Press, Inc.
DOI: 10.1007/978-1-0716-0974-3_13

Roll, right, repeat: short-term repeatability in the self-righting behaviour of a cold-water sea cucumber

Author(s): Jeff C. Clements, Ellen Schagerström, Sam Dupont, Fredrik Jutfelt, Kirti Ramesh
Published in: Journal of the Marine Biological Association of the United Kingdom, 100/1, 2020, Page(s) 115-120, ISSN 0025-3154
Publisher: Cambridge University Press
DOI: 10.1017/s0025315419001218

Ingested microscopic plastics translocate from the gut cavity of juveniles of the ascidian Ciona intestinalis

Author(s): S. Messinetti, S. Mercurio, G. Scarì, A. Pennati, R. Pennati
Published in: The European Zoological Journal, 86/1, 2019, Page(s) 189-195, ISSN 2475-0263
Publisher: The European Zoological Journal
DOI: 10.1080/24750263.2019.1616837

Toxicity tests of cryoprotecting agents for Mytilus galloprovincialis (Lamark, 1819) early developmental stages

Author(s): P. Heres, R. Rodriguez-Riveiro, J. Troncoso, E. Paredes
Published in: Cryobiology, 86, 2019, Page(s) 40-46, ISSN 0011-2240
Publisher: Academic Press
DOI: 10.1016/j.cryobiol.2019.01.001

Metabarcoding on planktonic larval stages: an efficient approach for detecting and investigating life cycle dynamics of benthic aliens

Author(s): Marjorie Couton, Thierry Comtet, Sabrina Le Cam, Erwan Corre, Frédérique Viard
Published in: Management of Biological Invasions, 10/4, 2019, Page(s) 657-689, ISSN 1989-8649
Publisher: International Journal of Applied Research on Biological Invasions
DOI: 10.3391/mbi.2019.10.4.06

Not all that looks like a Tubulinean is a Tubulinean: expectations and reality for the parasitic amoeba Janickina pigmentifera (Grassi, 1881)

Author(s): Ekaterina Volkova, Alexander Kudryavtsev
Published in: 39th annual meeting of the German Society for Protozoology, 2020
Publisher: University of Kaiserslautern

Cryopreservation of Blue mussel (Mytilus galloprovincialis) trochophore larvae and larval rearing development

Author(s): Rodriguez-Riveiro, R.; Heres, P.; Paredes, E.
Published in: 2018
Publisher: Universidade de Vigo

https://pureportal.spbu.ru/ru/publications/phylogeny-cryptic-diversity-and-benefits-of-investigating-marine-

Author(s): Kudryavtsev, A.; Volkova, E.; Voytinsky, F.
Published in: 39th Annual Meeting of the German Society for Protozoology, 2020
Publisher: University of Kaiserslautern

Characterization of eyes, photoreceptors and opsins in developmental stages of the chaetognath Spadella cephaloptera

Author(s): Wollesen, Tim; Rodríguez Monje, Sonia Victoria; Oel, Adam Phillip; Arendt, Detlev
Published in: biorxiv, 2020
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/871111

Molecular phylogeny of historical micro-invertebrate specimens using de novo sequence assembly

Author(s): R.J.S Orr; M. M. Sannum; S. Boessenkool; E. Di Martino; D.P. Gordon; H. Mello; M. Obst; M.H. Ramsfjell; A.M. Smith; L.H. Liow
Published in: biorxiv, 2020
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2020.03.30.015669

The influence of bait on remote underwater video observations in shallow-water coastal environments associated with the North-Eastern Atlantic

Author(s): Robyn E. Jones, Ross A. Griffin, Stephanie R. Januchowski-Hartley, Richard K.F. Unsworth
Published in: PeerJ, 8, 2020, Page(s) e9744, ISSN 2167-8359
Publisher: PeerJ
DOI: 10.7717/peerj.9744

Cryoprotectants synergy improve zebrafish sperm cryopreservation and offspring skeletogenesis.

Author(s): Paulo Gavaia; Ana Marreiros
Published in: Cryobiology, 1, 2019, ISSN 0011-2240
Publisher: Academic Press
DOI: 10.1016/j.cryobiol.2019.10.001

Macroalgal forests ecology, long-term monitoring, and conservation in a Mediterranean Marine Protected Area

Author(s): Alba Medrano Cuevas
Published in: 2019
Publisher: Universitat de Barcelona

Datasets

Night and day egestion rates of the copepod Centropages typicus in the presence and the absence of the predator Meganyctiphanes norvegica [Dataset]

Author(s): Olivares, Manuel; Tiselius, Peter; Calbet, Albert; Saiz, Enric
Published in: CSIC - Instituto de Ciencias del Mar (ICM)