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Comparative genomics of non-model invertebrates

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Publications

Comparative genomics and the nature of placozoan species

Author(s): Michael Eitel, Warren R. Francis, Frédérique Varoqueaux, Jean Daraspe, Hans-Jürgen Osigus, Stefan Krebs, Sergio Vargas, Helmut Blum, Gray A. Williams, Bernd Schierwater, Gert Wörheide
Published in: PLOS Biology, Issue 16/7, 2018, Page(s) e2005359, ISSN 1545-7885
DOI: 10.1371/journal.pbio.2005359

Increasing species sampling in chelicerate genomic-scale datasets provides support for monophyly of Acari and Arachnida

Author(s): Jesus Lozano-Fernandez, Alastair R. Tanner, Mattia Giacomelli, Robert Carton, Jakob Vinther, Gregory D. Edgecombe, Davide Pisani
Published in: Nature Communications, Issue 10/1, 2019, Page(s) 2295, ISSN 2041-1723
DOI: 10.1038/s41467-019-10244-7

Pancrustacean Evolution Illuminated by Taxon-Rich Genomic-Scale Data Sets with an Expanded Remipede Sampling

Author(s): Jesus Lozano-Fernandez, Mattia Giacomelli, James F Fleming, Albert Chen, Jakob Vinther, Philip Francis Thomsen, Henrik Glenner, Ferran Palero, David A Legg, Thomas M Iliffe, Davide Pisani, Jørgen Olesen
Published in: Genome Biology and Evolution, Issue 11/8, 2019, Page(s) 2055-2070, ISSN 1759-6653
DOI: 10.1093/gbe/evz097

OpenBiodiv: A Knowledge Graph for Literature-Extracted Linked Open Data in Biodiversity Science

Author(s): Lyubomir Penev, Mariya Dimitrova, Viktor Senderov, Georgi Zhelezov, Teodor Georgiev, Pavel Stoev, Kiril Simov
Published in: Publications, Issue 7/2, 2019, Page(s) 38, ISSN 2304-6775
DOI: 10.3390/publications7020038

Computational discovery of hidden breaks in 28S ribosomal RNAs across eukaryotes and consequences for RNA Integrity Numbers

Author(s): Paschalis Natsidis, Philipp H. Schiffer, Irepan Salvador-Martínez, Maximilian J. Telford
Published in: Scientific Reports, Issue 9/1, 2019, Page(s) 19477, ISSN 2045-2322
DOI: 10.1038/s41598-019-55573-1

The complete mitogenome of Arion vulgaris Moquin-Tandon, 1855 (Gastropoda: Stylommatophora): mitochondrial genome architecture, evolution and phylogenetic considerations within Stylommatophora

Author(s): Özgül Doğan, Michael Schrödl, Zeyuan Chen
Published in: PeerJ, Issue 8, 2020, Page(s) e8603, ISSN 2167-8359
DOI: 10.7717/peerj.8603

OpenBiodiv-O Ontology: Bridging the Gap Between Biodiversity Data and Biodiversity Publishing

Author(s): Mariya Dimitrova, Viktor Senderov, Kiril Simov, Teodor Georgiev, Lyubomir Penev
Published in: Biodiversity Information Science and Standards, Issue 3, 2019, Page(s) e35773, ISSN 2535-0897
DOI: 10.3897/biss.3.35773

Data Auditing, Cleaning and Quality Assurance Workflows from the Experience of a Scholarly Publisher

Author(s): Lyubomir Penev, Teodor Georgiev, Mariya Dimitrova, Yasen Mutafchiev, Pavel Stoev, Robert Mesibov
Published in: Biodiversity Information Science and Standards, Issue 3, 2019, Page(s) e35019, ISSN 2535-0897
DOI: 10.3897/biss.3.35019

The Pensoft Data Publishing Workflow: The FAIRway from articles to Linked Open Data

Author(s): Lyubomir Penev, Teodor Georgiev, Viktor Senderov, Mariya Dimitrova, Pavel Stoev
Published in: Biodiversity Information Science and Standards, Issue 3, 2019, Page(s) e35902, ISSN 2535-0897
DOI: 10.3897/biss.3.35902

Mobilizing Data from Taxonomic Literature for an Iconic Species (Dinosauria, Theropoda, Tyrannosaurus rex)

Author(s): Jeremy Miller, Yanell Braumuller, Puneet Kishor, David Shorthouse, Mariya Dimitrova, Guido Sautter, Donat Agosti
Published in: Biodiversity Information Science and Standards, Issue 3, 2019, Page(s) e37078, ISSN 2535-0897
DOI: 10.3897/biss.3.37078

OpenBiodiv: Linking Type Materials, Institutions, Locations and Taxonomic Names Extracted From Scholarly Literature

Author(s): Mariya Dimitrova, Viktor Senderov, Teodor Georgiev, Georgi Zhelezov, Lyubomir Penev
Published in: Biodiversity Information Science and Standards, Issue 3, 2019, Page(s) e35089, ISSN 2535-0897
DOI: 10.3897/biss.3.35089