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Extending the REACTOME Pathway Database for multi-omics biomedical data analysis

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Publications

IsoProt: A Complete and Reproducible Workflow To Analyze iTRAQ/TMT Experiments

Author(s): Johannes Griss, Goran Vinterhalter, Veit Schwämmle
Published in: Journal of Proteome Research, Issue 18/4, 2019, Page(s) 1751-1759, ISSN 1535-3893
DOI: 10.1021/acs.jproteome.8b00968

Spectral Clustering Improves Label-Free Quantification of Low-Abundant Proteins

Author(s): Johannes Griss, Florian Stanek, Otto Hudecz, Gerhard Dürnberger, Yasset Perez-Riverol, Juan Antonio Vizcaíno, Karl Mechtler
Published in: Journal of Proteome Research, Issue 18/4, 2019, Page(s) 1477-1485, ISSN 1535-3893
DOI: 10.1021/acs.jproteome.8b00377

B cells sustain inflammation and predict response to immune checkpoint blockade in human melanoma

Author(s): Johannes Griss, Wolfgang Bauer, Christine Wagner, Martin Simon, Minyi Chen, Katharina Grabmeier-Pfistershammer, Margarita Maurer-Granofszky, Florian Roka, Thomas Penz, Christoph Bock, Gao Zhang, Meenhard Herlyn, Katharina Glatz, Heinz Läubli, Kirsten D. Mertz, Peter Petzelbauer, Thomas Wiesner, Markus Hartl, Winfried F. Pickl, Rajasekharan Somasundaram, Peter Steinberger, Stephan N. Wagner
Published in: Nature Communications, Issue 10/1, 2019, ISSN 2041-1723
DOI: 10.1038/s41467-019-12160-2