INNOVATIVE EPIGENETIC MARKERS FOR FISH DOMESTICATION

Changes of fast muscle cellularity in male and female Nile tilapia (Oreochromis niloticus) over three generations of domestication

Autores: Ramsha Iqbal, Jorge Fernandes, Marit Bjørnevik, Jorge Galindo-Villegas
Publicado en: 2023
Editor: Nord University

Exploring epigenetic resistance to infectious salmon anaemia in Atlantic salmon by genome-wide bisulfite sequencing in heart tissue

Autores: Hans Ekvall, Jorge Fernandes, Ioannis Konstantinidis, Øivind Andersen, Jens Tetens
Publicado en: 2021
Editor: NMBU

DNA hydroxymethylation and improved growth of Nile tilapia (Oreochromis niloticus) during domestication

Autores: Ioannis Konstantinidis, Jorge Fernandes, Pål Sætrom
Publicado en: PhD in Aquatic Biosciences, 2020, ISBN 978-82-93165-36-1
Editor: Nord University

Circulating miRNAs as potential non-invasive biomarkers of growth in Nile tilapia (Oreochromis niloticus)

Autores: Alex Wardale, Jorge Fernandes
Publicado en: 2019
Editor: Nord University

Growth associated DNA methylation and hydroxymethylation profiles of the Nile tilapia (Oreochromis niloticus) pituitary uncover potential epigenetic markers

Autores: Hans Ekvall, Jorge Fernandes
Publicado en: 2018
Editor: Nord University

Nanoencapsulated clove oil applied as an anaesthetic at slaughtering decreases stress, extends the freshness, and lengthens shelf life of cultured fish

Autores: Amanda Esperanza López-Cánovas, Isabel Cabas, Elena Chaves-Pozo, María Ros-Chumillas, Laura Navarro-Segura, Antonio López-Gómez, Jorge M. O. Fernandes, Jorge Galindo-Villegas, Alfonsa García-Ayala
Publicado en: Foods, Edición 9, 2020, Página(s) 1750, ISSN 2304-8158
Editor: MDPI
DOI: 10.3390/foods9121750

Intergenerational transfer of persistent bacterial communities in female Nile tilapia

Autores: Yousri Abdelhafiz, Jorge Fernandes, Claudio Donati, Massimo Pindo, Viswanath Kiron
Publicado en: Frontiers in Microbiology, Edición 1664302X, 2022, ISSN 1664-302X
Editor: Frontiers Media
DOI: 10.3389/fmicb.2022.879990

Early fish domestication affects methylation of key genes involved in the rapid onset of the farmed phenotype

Autores: Tomasz Podgorniak; Anusha Dhanasiri; Xianquan Chen; Xu Ren; Pei-Fen Kuan; Jorge Fernandes
Publicado en: Epigenetics, Edición 15592294, 2022, ISSN 1559-2294
Editor: Landes Bioscience
DOI: 10.1080/15592294.2021.2017554

Integration of morphometrics and machine learning enables accurate distinction between wild and farmed common carp

Autores: Omid Jafari; Mansour Ebrahimi; Seyed Ali-Akbar Hedayati; Mehrshad Zeinalabedini; Hadi Poorbagher; Maryam Nasrolahpourmoghadam; Jorge M. O. Fernandes
Publicado en: Life, Edición 20751729, 2022, ISSN 2075-1729
Editor: MDPI
DOI: 10.3390/life12070957

Breeding strategy shapes the composition of bacterial communities in female Nile tilapia reared in a recirculating aquaculture system

Autores: Yousri Abdelhafiz, Jorge Fernandes, Simone Larger, Davide Albanese, Claudio Donati, Omid Jafari, Artem Nedoluzhko, Viswanath Kiron
Publicado en: Frontiers in Microbiology, Edición 1664302X, 2021, ISSN 1664-302X
Editor: Frontiers Media
DOI: 10.3389/fmicb.2021.709611

Function of Circular RNAs in Fish and Their Potential Application as Biomarkers

Autores: Golam Rbbani, Artem Nedoluzhko, Jorge Galindo-Villegas, Jorge M. O. Fernandes
Publicado en: International Journal of Molecular Sciences, Edición 22/13, 2021, Página(s) 7119, ISSN 1422-0067
Editor: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms22137119

Differences in the fast muscle methylome provide insight into sex-specific epigenetic regulation of growth in Nile tilapia during early stages of domestication

Autores: Tomasz Podgorniak, Sven Brockmann, Ioannis Konstantinidis, Jorge M. O. Fernandes
Publicado en: Epigenetics, Edición 14, 2019, Página(s) 1-19, ISSN 1559-2294
Editor: Landes Bioscience
DOI: 10.1080/15592294.2019.1618164

CircParser: a novel streamlined pipeline for circular RNA structure and host gene prediction in non-model organisms

Autores: Artem Nedoluzhko, Fedor Sharko, Md. Golam Rbbani, Anton Teslyuk, Ioannis Konstantinidis, Jorge M.O. Fernandes
Publicado en: PeerJ, Edición 8, 2020, Página(s) e8757, ISSN 2167-8359
Editor: PeerJ
DOI: 10.7717/peerj.8757

Major gene expression changes and epigenetic remodelling in Nile tilapia muscle after just one generation of domestication

Autores: Ioannis Konstantinidis, Pål Sætrom, Robin Mjelle, Artem V. Nedoluzhko, Diego Robledo, Jorge M. O. Fernandes
Publicado en: Epigenetics, 2020, Página(s) 1-16, ISSN 1559-2294
Editor: Landes Bioscience
DOI: 10.1080/15592294.2020.1748914

A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breeds

Autores: Artem V. Nedoluzhko, Natalia V. Slobodova, Fedor Sharko, Gulmira M. Shalgimbayeva, Svetlana V. Tsygankova, Eugenia S. Boulygina, Zsigmond Jeney, Van Q. Nguyen, Thế T. Pham, Đức T. Nguyen, Alexander A. Volkov, Jorge M.O. Fernandes, Sergey M. Rastorguev
Publicado en: Ecology and Evolution, Edición 10/12, 2020, Página(s) 5431-5439, ISSN 2045-7758
Editor: John Wiley and Sons Ltd
DOI: 10.1002/ece3.6286

Genome-wide hydroxymethylation profiles in liver of female Nile tilapia with distinct growth performance

Autores: Ioannis Konstantinidis, Pål Sætrom, Jorge Fernandes
Publicado en: Scientific Data, Edición 10, 2023, Página(s) 114, ISSN 2052-4463
Editor: Springer Nature
DOI: 10.1038/s41597-023-01996-5

Kisspeptin Influences the Reproductive Axis and Circulating Levels of microRNAs in Senegalese Sole

Autores: Catarina C. V. Oliveira, Elvira Fatsini, Ignacio Fernández, Catarina Anjos, François Chauvigné, Joan Cerdà, Robin Mjelle, Jorge M. O. Fernandes, Elsa Cabrita
Publicado en: International Journal of Molecular Sciences, Edición 21/23, 2020, Página(s) 9051, ISSN 1422-0067
Editor: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms21239051

Phytogenic bioactive compounds shape fish mucosal immunity

Autores: Jorge Galindo-Villegas, Joana Firmino, Felipe Reyes-López, Enric Gisbert
Publicado en: Frontiers in Immunology, Edición 16643224, 2021, ISSN 1664-3224
Editor: Frontiers Media S.A.
DOI: 10.3389/fimmu.2021.695973

Power Play of Commensal Bacteria in the Buccal Cavity of Female Nile Tilapia

Autores: Yousri Abdelhafiz; Jorge M.O. Fernandes; Erika Stefani; Davide Albanese; Claudio Donati; Viswanath Kiron
Publicado en: Frontiers in Microbiology, Edición 1664302X, 2021, ISSN 1664-302X
Editor: Frontiers Media
DOI: 10.3389/fmicb.2021.773351

Population genomics of introduced Nile tilapia Oreochromis niloticus (Linnaeus, 1758) in the Democratic Republic of the Congo: Repeated introductions since colonial times with multiple sources

Autores: Mare Geraerts,Carl Vangestel,Tom Artois, Jorge Fernandes, Michiel Jorissen, Auguste Manda, Célestin Mizani, Karen Smeets, Jos Snoeks, Gontran Sonet, Yang Tingbao, Maarten Van Steenberge, Emmanuel Vreven, Soleil Wamuini, Maarten Vanhove,Tine Huyse
Publicado en: Molecular Ecology, Edición 1365294X, 2022, Página(s) 3304-3322, ISSN 1365-294X
Editor: John Wiley & Sons Ltd
DOI: 10.1111/mec.16479

The first mitochondrial 5-methylcytosine map in a non-model teleost (Oreochromis niloticus) reveals extensive strand-specific and non-CpG methylation

Autores: Artem Nedoluzhko, Robin Mjelle, Maria Renström, Kaja H. Skjærven, Francesc Piferrer, Jorge M.O. Fernandes
Publicado en: Genomics, 2021, ISSN 0888-7543
Editor: Academic Press
DOI: 10.1016/j.ygeno.2021.07.007

Epigenetic mapping of the somatotropic axis in Nile tilapia reveals differential DNA hydroxymethylation marks associated with growth

Autores: Ioannis Konstantinidis, Dafni Anastasiadi, Pål Sætrom, Artem V. Nedoluzhko, Robin Mjelle, Tomasz Podgorniak, Francesc Piferrer, Jorge M.O. Fernandes
Publicado en: Genomics, Edición 113/5, 2021, Página(s) 2953-2964, ISSN 0888-7543
Editor: Academic Press
DOI: 10.1016/j.ygeno.2021.06.037

Non-coding RNAs in fish physiology and development: miRNAs as a cornerstone in gene networks

Autores: Francisco Toledo-Solís, Jorge Fernandes, Elena Sarropoulou, Ignacio Fernández
Publicado en: Cellular and Molecular Approaches in Fish Biology, 2021, Página(s) 105-160, ISBN 9780128222744
Editor: Academic Press/ Elsevier

GIA2018: 5th International Symposium on Genomics in Aquaculture

Autores: Jorge Fernandes, Elena Sarropoulou, Viswanath Kiron, Deborah Power, John Liu
Publicado en: Genomics in Aquaculture, 2018
Editor: CCWP Events Lda

Cellular and Molecular Approaches in Fish Biology

Autores: Ignacio Fernandez, Jorge Fernandes
Publicado en: 2021, ISBN 9780128222744
Editor: Academic Press/ Elsevier

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