Objective
Pax6 is a selector gene responsible for modulating the fates of many distinct cell types, within several developing organs such as the eye, central nervous system and pancreas. The complex expression patterns and functions of Pax6 are achieved by tight re gulation, particularly at the level of transcription, of spatiotemporal and quantitative expression. A good illustration of the importance of Pax6 regulation are human eye anomalies caused by disruption of Pax6 transcriptional regulation as a result of de letions many kilobases (thousands of nucleotides) downstream of transcriptional termination at the polyA addition site. The Pax6 gene encodes a transcription factor that is highly conserved across species as evolutionarily distant as Homo sapiens, Drosoph ila melanogaster and Dugesia.tigrina. Pax6 has also been shown to be highly conserved, across mammals and more broadly across vertebrates, for genomic cis-regulatory sequences spanning 200 kb outside the transcribed gene. These two forms of conservation are good indicators that the functional genetic networks mediated by Pax6 are well conserved in evolution. The objectives of this project are to characterise the conserved elements extensively in different phyla (in insects, fishes, mammals and across ver tebrates). The aim is to reveal the dynamics of the Pax6 genetic network. To accomplish this we will combine the use of bioinformatics with lab experimentation on zebrafish and collaboratively in human, mouse and Drosophila. We will investigate the gene s that directly regulate Pax6 transcription and those which are immediate downstream targets of Pax6 using evolutionary information on cis-regulatory sequences of all the genes in the putative Pax6 network. Already known PAX6 interactors SOX2 and OTX2, al ready implicated in human eye disease, will also be studied. Iterative refinement of the bioinformatic predictions will be undertaken as wet-lab verification of initial results emerge.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences biological sciences neurobiology
- natural sciences biological sciences genetics DNA
- natural sciences biological sciences biochemistry biomolecules proteins
- natural sciences biological sciences genetics mutation
- natural sciences biological sciences zoology mammalogy
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Keywords
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
FP6-2004-MOBILITY-5
See other projects for this call
Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Coordinator
LONDON
United Kingdom
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.