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Proteomics data collection

Objective

Based on the work of the Human Proteomics Organisation (HUPO) Proteomics Standards Initiative (PSI), we will coordinate the development and implementation of international standards for the representation of high-throughput Proteomics data. Focus will be on standardised data collection, and furthermore on standardised data analysis of protein identification by mass spectrometry. We will establish the basis to develop an international data exchange network of Proteomics data repositories.
This will include the implementation of prototypes of automated data submission pipelines in the leading European laboratories. Participants will be major European Bioinformatics tools developers and Proteomics data providers, and experts from non-European countries and invited Industry Partners to ensure the highest possible international standard.

Field of science

  • /natural sciences/computer and information sciences/data science/data analysis
  • /natural sciences/biological sciences/biochemistry/biomolecules/proteins/proteomics
  • /natural sciences/chemical sciences/analytical chemistry/mass spectrometry
  • /natural sciences/computer and information sciences/data science/data exchange

Call for proposal

FP6-2005-LIFESCIHEALTH-6
See other projects for this call

Funding Scheme

CA - Coordination action

Coordinator

RUHR-UNIVERSITAET BOCHUM
Address
Universitaetsstr. 150
Bochum
Germany

Participants (11)

EUROPEAN MOLECULAR BIOLOGY LABORATORY - EUROPEAN BIOINFORMATICS INSTITUTE
Germany
Address
Meyerhofstrasse 1
Heidelberg
EIDGENOESSISCHE TECHNISCHE HOCHSCHULE - ETH ZUERICH
Switzerland
Address
Raemistrasse 101. Eth Zentrum
Zuerich
FLANDERS INTERUNIVERSITY INSTITUTE FOR BIOTECHNOLOGY VZW
Belgium
Address
Rijvisschestraat 120
Zwijnaarde
NATIONAL UNIVERSITY UNIVERSITY OF IRELAND, DUBLIN
Ireland
Address
Belfield
Dublin
SWISS INSTITUTE OF BIOINFORMATICS
Switzerland
Address
Rue Michel-servet 1
Geneva 4
LUNDS UNIVERSITET
Sweden
Address
Paradisgatan 5C
Lund
THE UNIVERSITY OF MANCHESTER
United Kingdom
Address
Oxford Road
Manchester
GENEVA BIOINFORMATICS (GENEBIO) SA
Switzerland
Address
Avenue De Champel 25
Geneva
PROTAGEN AG
Germany
Address
Otto-hahn-strasse 15
Dortmund
BRUKER DALTONICS GMBH
Germany
Address
Fahrenheitstr. 4
Bremen
MATRIX SCIENCE LIMITED
United Kingdom
Address
10 Perrin's Lane'
London