Biochemical and mechanochemical mechanisms in polarized cells

Project Information

BIOPOL

Grant agreement ID: 641639

DOI 10.3030/641639

Project closed

EC signature date 5 December 2014

Start date 1 January 2015

End date 31 December 2018

Funded under

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Total cost € 3 911 897,16

EU contribution € 3 911 897,16

Coordinated by

THE UNIVERSITY OF SHEFFIELD
United Kingdom

Deliverables

Other (8)

BIOPOL Jobs advertised

Advertisement of Jobs on Eurxess

Business plan competition

ESRs will participte in a biocompany competition organized by our associated partner Biotechnology YES

Outreach IV

BIOPOL will organize a BIOPOL specific open day

Appointment of Supervisory Board

Supervisory Board committee members selected

Scientific publications/Dissemination of scientific results

Scientific publications, poster or oral meeting presentations of results for key findings in each scientific work package

Summer school

Summer school on cell mechanics and tissue engineering

Outreach activity III

Outreach activity III completed

Workshop III

This work shop focuses on entrepreneurship (Mini-MBA)

Websites, patent fillings, videos etc. (4)

Fellow project videos

Fellows introduce themselves and their project in form of a brief video

Summer school lectures videos

Key lectures of the summer school will be video-taped and posted on the BIOPOL website

BIOPOL website/flyer

Website installed/Flyer distributed

BIOPOL Facebook/Twitter account

Facebook and Twitter-account established

Documents, reports (5)

Outreach activity II

Outreach activity II completed

Conference abstract book

Results will be published in an abstract book

Outreach activity I

Outreach activity I performed by fellows

Fellow own workshop

Fellows organize their own workshop without interference of senior scientists

Summer school proceedings

Summerschool proceedings will be made available on the BIOPOL website

Publications

Peer reviewed articles (8)

High-throughput compound evaluation on 3D networks of neurons and glia in a microfluidic platform

Author(s): Nienke R. Wevers, Remko van Vught, Karlijn J. Wilschut, Arnaud Nicolas, Chiwan Chiang, Henriette L. Lanz, Sebastiaan J. Trietsch, Jos Joore, Paul Vulto
Published in: Scientific Reports, Issue 6, 2016, Page(s) 38856, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/srep38856

Membrane-free culture and real-time barrier integrity assessment of perfused intestinal epithelium tubes

Author(s): Sebastiaan J. Trietsch, Elena Naumovska, Dorota Kurek, Meily C. Setyawati, Marianne K. Vormann, Karlijn J. Wilschut, Henriëtte L. Lanz, Arnaud Nicolas, Chee Ping Ng, Jos Joore, Stefan Kustermann, Adrian Roth, Thomas Hankemeier, Annie Moisan, Paul Vulto
Published in: Nature Communications, Issue 8/1, 2017, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-017-00259-3

Tox_(R)CNN: Deep learning-based nuclei profiling tool for drug toxicity screening

Author(s): Daniel Jimenez-Carretero, Vahid Abrishami, Laura Fernández-de-Manuel, Irene Palacios, Antonio Quílez-Álvarez, Alberto Díez-Sánchez, Miguel A. del Pozo, María C. Montoya
Published in: PLOS Computational Biology, Issue 14/11, 2018, Page(s) e1006238, ISSN 1553-7358
Publisher: Public Library of Science
DOI: 10.1371/journal.pcbi.1006238

Forty years on: clathrin-coated pits continue to fascinate

Author(s): Hannes Maib, Elizabeth Smythe, Kathryn Ayscough
Published in: Molecular Biology of the Cell, Issue 28/7, 2017, Page(s) 843-847, ISSN 1059-1524
Publisher: American Society for Cell Biology
DOI: 10.1091/mbc.e16-04-0213

Mechanical Mapping of Spinal Cord Growth and Repair in Living Zebrafish Larvae by Brillouin Imaging

Author(s): Raimund Schlüßler, Stephanie Möllmert, Shada Abuhattum, Gheorghe Cojoc, Paul Müller, Kyoohyun Kim, Conrad Möckel, Conrad Zimmermann, Jürgen Czarske, Jochen Guck
Published in: Biophysical Journal, Issue 115/5, 2018, Page(s) 911-923, ISSN 0006-3495
Publisher: Biophysical Society
DOI: 10.1016/j.bpj.2018.07.027

Enlightening discriminative network functional modules behind Principal Component Analysis separation in differential-omic science studies

Author(s): Sara Ciucci, Yan Ge, Claudio Durán, Alessandra Palladini, Víctor Jiménez-Jiménez, Luisa María Martínez-Sánchez, Yuting Wang, Susanne Sales, Andrej Shevchenko, Steven W. Poser, Maik Herbig, Oliver Otto, Andreas Androutsellis-Theotokis, Jochen Guck, Mathias J. Gerl, Carlo Vittorio Cannistraci
Published in: Scientific Reports, Issue 7/1, 2017, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/srep43946

Intracellular Mass Density Increase Is Accompanying but Not Sufficient for Stiffening and Growth Arrest of Yeast Cells

Author(s): Shada Abuhattum, Kyoohyun Kim, Titus M. Franzmann, Anne Eßlinger, Daniel Midtvedt, Raimund Schlüßler, Stephanie Möllmert, Hui-Shun Kuan, Simon Alberti, Vasily Zaburdaev, Jochen Guck
Published in: Frontiers in Physics, Issue 6, 2018, ISSN 2296-424X
Publisher: Higher Education Press & Springer Science+Business Media
DOI: 10.3389/fphy.2018.00131

Cargo regulates clathrin-coated pit invagination via clathrin light chain phosphorylation

Author(s): Hannes Maib, Filipe Ferreira, Stéphane Vassilopoulos, Elizabeth Smythe
Published in: The Journal of Cell Biology, Issue 217/12, 2018, Page(s) 4253-4266, ISSN 0021-9525
Publisher: Rockefeller University Press
DOI: 10.1083/jcb.201805005

Book chapters (1)

Fluorescence eXclusion Measurement of volume in live cells

Author(s): C. Cadart, E. Zlotek-Zlotkiewicz, L. Venkova, O. Thouvenin, V. Racine, M. Le Berre, S. Monnier, M. Piel
Published in: Cell Polarity and Morphogenesis, Issue 139, 2017, Page(s) 103-120, ISBN 9780-128093733
Publisher: Elsevier
DOI: 10.1016/bs.mcb.2016.11.009