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Using cis-regulatory mutations to highlight polygenic adaptation in natural plant systems

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Publications

Cis-regulatory evolution spotlights species differences in the adaptive potential of gene expression plasticity

Author(s): F. He, K. A. Steige, V. Kovacova, U. Göbel, M. Bouzid, P. D. Keightley, A. Beyer, J. de Meaux
Published in: Nature Communications, 12/1, 2021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-021-23558-2

Maintenance of Adaptive Dynamics and No Detectable Load in a Range-Edge Outcrossing Plant Population

Author(s): Margarita Takou, Tuomas Hämälä, Evan M Koch, Kim A Steige, Hannes Dittberner, Levi Yant, Mathieu Genete, Shamil Sunyaev, Vincent Castric, Xavier Vekemans, Outi Savolainen, Juliette de Meaux
Published in: Molecular Biology and Evolution, 38/5, 2021, Page(s) 1820-1836, ISSN 1537-1719
Publisher: Oxford University Press
DOI: 10.1093/molbev/msaa322

Temporal fitness fluctuations in experimental Arabidopsis thaliana populations

Author(s): Jinyong Hu, Li Lei, Juliette de Meaux
Published in: PLOS ONE, 12/6, 2017, Page(s) e0178990, ISSN 1932-6203
Publisher: Public Library of Science
DOI: 10.1371/journal.pone.0178990

The Footprint of Polygenic Adaptation on Stress-Responsive Cis -Regulatory Divergence in the Arabidopsis Genus

Author(s): Fei He, Agustin L. Arce, Gregor Schmitz, Maarten Koornneef, Polina Novikova, Andreas Beyer, Juliette de Meaux
Published in: Molecular Biology and Evolution, 33/8, 2016, Page(s) 2088-2101, ISSN 0737-4038
Publisher: Oxford University Press
DOI: 10.1093/molbev/msw096

Robustness of Transposable Element Regulation but No Genomic Shock Observed in Interspecific Arabidopsis Hybrids

Author(s): Ulrike Göbel, Agustin L Arce, Fei He, Alain Rico, Gregor Schmitz, Juliette de Meaux
Published in: Genome Biology and Evolution, 10/6, 2018, Page(s) 1403-1415, ISSN 1759-6653
Publisher: Oxford University Press
DOI: 10.1093/gbe/evy095

Natural variation in stomata size contributes to the local adaptation of water-use efficiency in Arabidopsis thaliana

Author(s): Hannes Dittberner, Arthur Korte, Tabea Mettler-Altmann, Andreas P. M. Weber, Grey Monroe, Juliette de Meaux
Published in: Molecular Ecology, 27/20, 2018, Page(s) 4052-4065, ISSN 0962-1083
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/mec.14838

Assortment of Flowering Time and Immunity Alleles in Natural Arabidopsis thaliana Populations Suggests Immunity and Vegetative Lifespan Strategies Coevolve

Author(s): Shirin Glander, Fei He, Gregor Schmitz, Anika Witten, Arndt Telschow, Juliette de Meaux
Published in: Genome Biology and Evolution, 10/9, 2018, Page(s) 2278-2291, ISSN 1759-6653
Publisher: Oxford University Press
DOI: 10.1093/gbe/evy124

Cis -regulatory variation in plant genomes and the impact of natural selection

Author(s): Juliette de Meaux
Published in: American Journal of Botany, 2018, ISSN 0002-9122
Publisher: Botanical Society of America, Inc.
DOI: 10.1002/ajb2.1180

Linking genes with ecological strategies in Arabidopsis thaliana

Author(s): Margarita Takou, Benedict Wieters, Stanislav Kopriva, George Coupland, Anja Linstädter, Juliette De Meaux
Published in: Journal of Experimental Botany, 70/4, 2018, Page(s) 1141-1151, ISSN 0022-0957
Publisher: Oxford University Press
DOI: 10.1093/jxb/ery447

Polygenic adaptation of rosette growth in Arabidopsis thaliana

Author(s): Benedict Wieters, Kim A. Steige, Fei He, Evan M. Koch, Sebastián E. Ramos-Onsins, Hongya Gu, Ya-Long Guo, Shamil Sunyaev, Juliette de Meaux
Published in: PLOS Genetics, 17/1, 2021, Page(s) e1008748, ISSN 1553-7404
Publisher: PLOS
DOI: 10.1371/journal.pgen.1008748

Polygenic adaptation of rosette growth variation in Arabidopsis thaliana populations

Author(s): Benedict Wieters, Kim A. Steige, Fei He, Evan M. Koch, Sebastián E. Ramos-Onsins, Hongya Gu, Ya-Long Guo, Shamil Sunyaev, Juliette de Meaux
Published in: 2020
Publisher: biorxiv
DOI: 10.1101/2020.03.31.018341

Maintenance of adaptive dynamics in a bottlenecked range-edge population that retained out-crossing.

Author(s): Takou M, Hämälä T, Koch E, Steige KA, Dittberner H, Yant L, Genete M, Sunyaev S, Castric V, Vekemans X, Savolainen O, de Meaux J.
Published in: 2019
Publisher: Biorxiv
DOI: 10.1101/709873