The ABC of Cell Volume Regulation

Project Information

ABCvolume

Grant agreement ID: 670578

DOI

10.3030/670578

Project closed

EC signature date 19 June 2015

Start date 1 July 2015

End date 30 June 2020

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 2 247 230,68

EU contribution

€ 2 247 230,68

Coordinated by

RIJKSUNIVERSITEIT GRONINGEN
Netherlands

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (22)

Kinetic Modelling of Transport Inhibition by Substrates in ABC Importers

Author(s): Marijn de Boer, Thorben Cordes, Bert Poolman
Published in: Journal of Molecular Biology, 2020, ISSN 0022-2836
Publisher: Academic Press
DOI: 10.1016/j.jmb.2020.08.008

Real-Time Conformational Changes and Controlled Orientation of Native Proteins Inside a Protein Nanoreactor

Author(s): Veerle Van Meervelt, Misha Soskine, Shubham Singh, Gea K. Schuurman-Wolters, Hein J. Wijma, Bert Poolman, Giovanni Maglia
Published in: Journal of the American Chemical Society, Issue 139/51, 2017, Page(s) 18640-18646, ISSN 0002-7863
Publisher: American Chemical Society
DOI: 10.1021/jacs.7b10106

Energy Coupling Efficiency in the Type I ABC Transporter GlnPQ

Author(s): Jelger A. Lycklama a Nijeholt, Ruslan Vietrov, Gea K. Schuurman-Wolters, Bert Poolman
Published in: Journal of Molecular Biology, Issue 430/6, 2018, Page(s) 853-866, ISSN 0022-2836
Publisher: Academic Press
DOI: 10.1016/j.jmb.2018.02.001

Niosomes, an alternative for liposomal delivery

Author(s): Rianne Bartelds, Mohammad Hadi Nematollahi, Tjeerd Pols, Marc C. A. Stuart, Abbas Pardakhty, Gholamreza Asadikaram, Bert Poolman
Published in: PLOS ONE, Issue 13/4, 2018, Page(s) e0194179, ISSN 1932-6203
Publisher: Public Library of Science
DOI: 10.1371/journal.pone.0194179

Steric exclusion and protein conformation determine the localization of plasma membrane transporters

Author(s): Frans Bianchi, Łukasz Syga, Gemma Moiset, Dian Spakman, Paul E. Schavemaker, Christiaan M. Punter, Anne-Bart Seinen, Antoine M. van Oijen, Andrew Robinson, Bert Poolman
Published in: Nature Communications, Issue 9/1, 2018, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-018-02864-2

Protein Linkers Provide Limits on the Domain Interactions in the ABC Importer GlnPQ and Determine the Rate of Transport

Author(s): Gea K. Schuurman-Wolters, Marijn de Boer, Martyna K. Pietrzyk, Bert Poolman
Published in: Journal of Molecular Biology, Issue 430/8, 2018, Page(s) 1249-1262, ISSN 0022-2836
Publisher: Academic Press
DOI: 10.1016/j.jmb.2018.02.014

Ionic Strength Sensing in Living Cells

Author(s): Boqun Liu, Bert Poolman, Arnold J. Boersma
Published in: ACS Chemical Biology, Issue 12/10, 2017, Page(s) 2510-2514, ISSN 1554-8929
Publisher: American Chemical Society
DOI: 10.1021/acschembio.7b00348

Design and Properties of Genetically Encoded Probes for Sensing Macromolecular Crowding

Author(s): Boqun Liu, Christoffer Åberg, Floris J. van Eerden, Siewert J. Marrink, Bert Poolman, Arnold J. Boersma
Published in: Biophysical Journal, Issue 112/9, 2017, Page(s) 1929-1939, ISSN 0006-3495
Publisher: Biophysical Society
DOI: 10.1016/j.bpj.2017.04.004

Ribosome surface properties may impose limits on the nature of the cytoplasmic proteome

Author(s): Paul E Schavemaker, Wojciech M Śmigiel, Bert Poolman
Published in: eLife, Issue 6, 2017, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/eLife.30084

A general mechanism of ribosome dimerization revealed by single-particle cryo-electron microscopy

Author(s): Linda E. Franken, Gert T. Oostergetel, Tjaard Pijning, Pranav Puri, Valentina Arkhipova, Egbert J. Boekema, Bert Poolman, Albert Guskov
Published in: Nature Communications, Issue 8/1, 2017, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-017-00718-x

Microorganisms maintain crowding homeostasis

Author(s): Jonas van den Berg, Arnold J. Boersma, Bert Poolman
Published in: Nature Reviews Microbiology, Issue 15/5, 2017, Page(s) 309-318, ISSN 1740-1526
Publisher: Nature Publishing Group
DOI: 10.1038/nrmicro.2017.17

Crystal Structure of the Substrate-Binding Domain from Listeria monocytogenes Bile-Resistance Determinant BilE

Author(s): Stephanie Ruiz, Gea Schuurman-Wolters, Bert Poolman
Published in: Crystals, Issue 6/12, 2016, Page(s) 162, ISSN 2073-4352
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/cryst6120162

An updated structural classification of substrate-binding proteins

Author(s): Giel H. Scheepers, Jelger A. Lycklama a Nijeholt, Bert Poolman
Published in: FEBS Letters, Issue 590/23, 2016, Page(s) 4393-4401, ISSN 0014-5793
Publisher: Elsevier BV
DOI: 10.1002/1873-3468.12445

Cell Fuelling and Metabolic Energy Conservation in Synthetic Cells

Author(s): Hendrik R. Sikkema, Bauke F. Gaastra, Tjeerd Pols, Bert Poolman
Published in: ChemBioChem, Issue 20/20, 2019, Page(s) 2581-2592, ISSN 1439-4227
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/cbic.201900398

A synthetic metabolic network for physicochemical homeostasis

Author(s): Tjeerd Pols, Hendrik R. Sikkema, Bauke F. Gaastra, Jacopo Frallicciardi, Wojciech M. Śmigiel, Shubham Singh, Bert Poolman
Published in: Nature Communications, Issue 10/1, 2019, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-019-12287-2

Physiochemical Modeling of Vesicle Dynamics upon Osmotic Upshift

Author(s): Matteo Gabba, Bert Poolman
Published in: Biophysical Journal, Issue 118/2, 2020, Page(s) 435-447, ISSN 0006-3495
Publisher: Biophysical Society
DOI: 10.1016/j.bpj.2019.11.3383

Weak Acid Permeation in Synthetic Lipid Vesicles and Across the Yeast Plasma Membrane

Author(s): Matteo Gabba, Jacopo Frallicciardi, Joury van ’t Klooster, Ryan Henderson, Łukasz Syga, Robert Mans, Antonius J.A. van Maris, Bert Poolman
Published in: Biophysical Journal, Issue 118/2, 2020, Page(s) 422-434, ISSN 0006-3495
Publisher: Biophysical Society
DOI: 10.1016/j.bpj.2019.11.3384

Decreased Effective Macromolecular Crowding in Escherichia coli Adapted to Hyperosmotic Stress

Author(s): Boqun Liu, Zarief Hasrat, Bert Poolman, Arnold J. Boersma
Published in: Journal of Bacteriology, Issue 201/10, 2019, ISSN 0021-9193
Publisher: American Society for Microbiology
DOI: 10.1128/jb.00708-18

Conformational and dynamic plasticity in substrate-binding proteins underlies selective transport in ABC importers

Author(s): Marijn de Boer, Giorgos Gouridis, Ruslan Vietrov, Stephanie L Begg, Gea K Schuurman-Wolters, Florence Husada, Nikolaos Eleftheriadis, Bert Poolman, Christopher A McDevitt, Thorben Cordes
Published in: eLife, Issue 8, 2019, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/elife.44652

A Trifunctional Linker for Palmitoylation and Peptide and Protein Localization in Biological Membranes

Author(s): Łukasz Syga, Reinder H. Vries, Hugo Oosterhout, Rianne Bartelds, Arnold J. Boersma, Gerard Roelfes, Bert Poolman
Published in: ChemBioChem, 2020, ISSN 1439-4227
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/cbic.201900655

Physicochemical considerations for bottom-up synthetic biology

Author(s): Wojciech Mikołaj Śmigiel, Pauline Lefrançois, Bert Poolman
Published in: Emerging Topics in Life Sciences, Issue 3/5, 2019, Page(s) 445-458, ISSN 2397-8554
Publisher: Royal Society
DOI: 10.1042/etls20190017

Enzymology of the pathway for ATP production by arginine breakdown

Author(s): Tjeerd Pols, Shubham Singh, Cecile Deelman‐Driessen, Bauke F. Gaastra, Bert Poolman
Published in: The FEBS Journal, 2020, ISSN 1742-464X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/febs.15337