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spim4You: customised solutions for light sheet microscopes and imaging data analysis.


Light-sheet microscopy for everyone? Experience of building an OpenSPIM to study flatworm development

Author(s): Johannes Girstmair, Anne Zakrzewski, François Lapraz, Mette Handberg-Thorsager, Pavel Tomancak, Peter Gabriel Pitrone, Fraser Simpson, Maximilian J. Telford
Published in: BMC Developmental Biology, Issue 16/1, 2016, ISSN 1471-213X
Publisher: BioMed Central
DOI: 10.1186/s12861-016-0122-0

Using Light Sheet Fluorescence Microscopy to Image Zebrafish Eye Development

Author(s): Jaroslav Icha, Christopher Schmied, Jaydeep Sidhaye, Pavel Tomancak, Stephan Preibisch, Caren Norden
Published in: Journal of Visualized Experiments, Issue 110, 2016, ISSN 1940-087X
Publisher: MYJoVE Corporation
DOI: 10.3791/53966

An automated workflow for parallel processing of large multiview SPIM recordings

Author(s): Christopher Schmied, Peter Steinbach, Tobias Pietzsch, Stephan Preibisch, Pavel Tomancak
Published in: Bioinformatics, Issue 32/7, 2016, Page(s) 1112-1114, ISSN 1367-4803
Publisher: Oxford University Press
DOI: 10.1093/bioinformatics/btv706

Sample Preparation and Mounting of Drosophila Embryos for Multiview Light Sheet Microscopy.

Author(s): Christopher Schmied, Pavel Tomancak
Published in: Methods in molecular biology, 2016, Page(s) 189-202, ISSN 1940-6029
Publisher: Springer New York
DOI: 10.1007/978-1-4939-6371-3_10

Exploring Time-dependent Scientific Data Using Spatially Aware Mobiles and Large Displays.

Author(s): Sollich, H., von Zadow, U., Pietzsch, T., Tomancak, P., Dachselt, R.
Published in: Proceedings of the 2016 ACM on Interactive Surfaces and Spaces (2016), 2016
Publisher: ACM

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