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Quantitative analysis of DNA methylation maintenance within chromatin

Publications

Millennia-long epigenetic fluctuations generate intragenic DNA methylation variance in Arabidopsis populations

Author(s): Briffa, Amy; Hollwey, ElizabethISTA; Shahzad, Zaigham; Moore, Jonathan D.; Lyons, David B.; Howard, Martin; Zilberman, DanielISTA
Published in: Cell Systems, 2023, ISSN 2405-4720
Publisher: Elsevier Inc
DOI: 10.1016/j.cels.2023.10.007

Histone H1 prevents non-CG methylation-mediated small RNA biogenesis in Arabidopsis heterochromatin

Author(s): Jaemyung Choi, David B Lyons, Daniel Zilberman
Published in: eLife, Issue 10, 2023, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/elife.72676

DDM1 and Lsh remodelers allow methylation of DNA wrapped in nucleosomes

Author(s): David B Lyons, Daniel Zilberman
Published in: eLife, Issue 6, 2017, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/eLife.30674

An evolutionary case for functional gene body methylation in plants and animals

Author(s): Daniel Zilberman
Published in: Genome Biology, Issue 18/1, 2017, ISSN 1474-760X
Publisher: BioMed Central
DOI: 10.1186/s13059-017-1230-2

DNA Methylation and Histone H1 Jointly Repress Transposable Elements and Aberrant Intragenic Transcripts

Author(s): Jaemyung Choi, David B. Lyons, M. Yvonne Kim, Jonathan D. Moore, Daniel Zilberman
Published in: Molecular Cell, 2019, ISSN 1097-2765
Publisher: Cell Press
DOI: 10.1016/j.molcel.2019.10.011

DNA methylation is maintained with high fidelity in the honey bee germline and exhibits global non-functional fluctuations during somatic development

Author(s): Keith D. Harris, James P. B. Lloyd, Katherine Domb, Daniel Zilberman, Assaf Zemach
Published in: Epigenetics & Chromatin, Issue 12/1, 2019, ISSN 1756-8935
Publisher: BioMed Central
DOI: 10.1186/s13072-019-0307-4

Extensive de novo activity stabilizes epigenetic inheritance of CG methylation in Arabidopsis transposons

Author(s): David B. Lyons, Amy Briffa, Shengbo He, Jaemyung Choi, Elizabeth Hollwey, Jack Colicchio, Ian Anderson, Xiaoqi Feng, Martin Howard, Daniel Zilberman
Published in: Cell Reports, Issue 42, 2024, Page(s) 112132, ISSN 2211-1247
Publisher: Cell Press
DOI: 10.1016/j.celrep.2023.112132

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