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Atomic precision materials engineering

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Publications

ab initio description of bonding for transmission electron microscopy.

Author(s): Jacob Madsen; Timothy J. Pennycook; Toma Susi
Published in: Ultramicroscopy, 231, 2021, Page(s) 113253, ISSN 0304-3991
Publisher: Elsevier BV
DOI: 10.1016/j.ultramic.2021.113253

Tailoring Electronic and Magnetic Properties of Graphene by Phosphorus Doping

Author(s): Rostislav Langer; Piotr Błoński; Christoph Hofer; Petr Lazar; Kimmo Mustonen; Jannik C. Meyer; Toma Susi; Michal Otyepka
Published in: ACS Applied Materials and Interfaces, 12, 2020, Page(s) 34074–34085, ISSN 1944-8244
Publisher: American Chemical Society
DOI: 10.1021/acsami.0c07564

Mechanism of Electron-Beam Manipulation of Single-Dopant Atoms in Silicon.

Author(s): Alexander Markevich; Bethany M. Hudak; Jacob Madsen; Jiaming Song; Paul C. Snijders; Andrew R. Lupini; Toma Susi
Published in: Journal of Physical Chemistry C, 125 / 29, 2021, Page(s) 16041–16048, ISSN 1932-7447
Publisher: American Chemical Society
DOI: 10.1021/acs.jpcc.1c03549

The abTEM code: transmission electron microscopy from first principles

Author(s): Jacob Madsen; Toma Susi
Published in: Open Research Europe, 1, 2021, Page(s) 24, ISSN 2732-5121
Publisher: F1000 Research Limited on behalf of the European Commission
DOI: 10.12688/openreseurope.13015.1

Atomic-Level Structural Engineering of Graphene on a Mesoscopic Scale.

Author(s): Alberto Trentino; Jacob Madsen; Andreas Mittelberger; Clemens Mangler; Toma Susi; Kimmo Mustonen; Jani Kotakoski
Published in: Nano Letters, 21 / 12, 2021, Page(s) 5179–5185, ISSN 1530-6984
Publisher: American Chemical Society
DOI: 10.1021/acs.nanolett.1c01214

Towards Exotic Layered Materials: 2D Cuprous Iodide

Author(s): Kimmo Mustonen; Christoph Hofer; Peter Kotrusz; Alexander Markevich; Martin Hulman; Clemens Mangler; Toma Susi; Timothy J. Pennycook; Karol Hricovini; Christine M. Richter; Jannik C. Meyer; Jani Kotakoski; Viera Skákalová
Published in: Advanced Materials, 34 / 9, 2021, Page(s) 2106922, ISSN 1613-6810
Publisher: Wiley - V C H Verlag GmbbH & Co.
DOI: 10.1002/adma.202106922

Step-By-Step Atomic Insights into Structural Reordering from 2D to 3D MoS2

Author(s): Heena Inani; Dong Hoon Shin; Jacob Madsen; Hyun Jeong Jeong; Min Hee Kwon; Niall McEvoy; Toma Susi; Clemens Mangler; Sangwook Lee; Kimmo Mustonen; Jani Kotakoski
Published in: Advanced Functional Materials, 31 / 13, 2021, Page(s) 2008395, ISSN 1613-6810
Publisher: Wiley - V C H Verlag GmbbH & Co.
DOI: 10.1002/adfm.202008395

Electron-Beam Manipulation of Silicon Dopants in Graphene

Author(s): Mukesh Tripathi, Andreas Mittelberger, Nicholas A. Pike, Clemens Mangler, Jannik C. Meyer, Matthieu J. Verstraete, Jani Kotakoski, Toma Susi
Published in: Nano Letters, 18/8, 2018, Page(s) 5319-5323, ISSN 1530-6984
Publisher: American Chemical Society
DOI: 10.1021/acs.nanolett.8b02406

Efficient first principles simulation of electron scattering factors for transmission electron microscopy

Author(s): Toma Susi, Jacob Madsen, Ursula Ludacka, Jens Jørgen Mortensen, Timothy J. Pennycook, Zhongbo Lee, Jani Kotakoski, Ute Kaiser, Jannik C. Meyer
Published in: Ultramicroscopy, 197, 2019, Page(s) 16-22, ISSN 0304-3991
Publisher: Elsevier BV
DOI: 10.1016/j.ultramic.2018.11.002

Atomic-Scale Deformations at the Interface of a Mixed-Dimensional van der Waals Heterostructure

Author(s): Kimmo Mustonen, Aqeel Hussain, Christoph Hofer, Mohammad R. A. Monazam, Rasim Mirzayev, Kenan Elibol, Patrik Laiho, Clemens Mangler, Hua Jiang, Toma Susi, Esko I. Kauppinen, Jani Kotakoski, Jannik C. Meyer
Published in: ACS Nano, 12/8, 2018, Page(s) 8512-8519, ISSN 1936-0851
Publisher: American Chemical Society
DOI: 10.1021/acsnano.8b04050

Atomic-Scale in Situ Observations of Crystallization and Restructuring Processes in Two-Dimensional MoS 2 Films

Author(s): Bernhard C. Bayer, Reinhard Kaindl, Mohammad Reza Ahmadpour Monazam, Toma Susi, Jani Kotakoski, Tushar Gupta, Dominik Eder, Wolfgang Waldhauser, Jannik C. Meyer
Published in: ACS Nano, 12/8, 2018, Page(s) 8758-8769, ISSN 1936-0851
Publisher: American Chemical Society
DOI: 10.1021/acsnano.8b04945

Silicon Substitution in Nanotubes and Graphene via Intermittent Vacancies

Author(s): Heena Inani, Kimmo Mustonen, Alexander Markevich, Er-Xiong Ding, Mukesh Tripathi, Aqeel Hussain, Clemens Mangler, Esko I. Kauppinen, Toma Susi, Jani Kotakoski
Published in: The Journal of Physical Chemistry C, 123 (20), 2019, Page(s) 13136-13140, ISSN 1932-7447
Publisher: American Chemical Society
DOI: 10.1021/acs.jpcc.9b01894

Electron‐Beam Manipulation of Silicon Impurities in Single‐Walled Carbon Nanotubes

Author(s): Kimmo Mustonen, Alexander Markevich, Mukesh Tripathi, Heena Inani, Er‐Xiong Ding, Aqeel Hussain, Clemens Mangler, Esko I. Kauppinen, Jani Kotakoski, Toma Susi
Published in: Advanced Functional Materials, 29/52, 2019, Page(s) 1901327, ISSN 1616-301X
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/adfm.201901327

Intrinsic core level photoemission of suspended monolayer graphene

Author(s): Toma Susi, Mattia Scardamaglia, Kimmo Mustonen, Mukesh Tripathi, Andreas Mittelberger, Mohamed Al-Hada, Matteo Amati, Hikmet Sezen, Patrick Zeller, Ask H. Larsen, Clemens Mangler, Jannik C. Meyer, Luca Gregoratti, Carla Bittencourt, Jani Kotakoski
Published in: Physical Review Materials, 2/7, 2018, Page(s) 074005, ISSN 2475-9953
Publisher: American Physical Society
DOI: 10.1103/PhysRevMaterials.2.074005

Influence of temperature on the displacement threshold energy in graphene

Author(s): Alexandru Ionut Chirita Mihaila, Toma Susi, Jani Kotakoski
Published in: Scientific Reports, 9/1, 2019, Page(s) 12981, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-019-49565-4

Zigzag sp 2 Carbon Chains Passing through an sp 3 Framework: A Driving Force toward Room-Temperature Ferromagnetic Graphene

Author(s): Jiří Tuček, Kateřina Holá, Giorgio Zoppellaro, Piotr Błoński, Rostislav Langer, Miroslav Medved’, Toma Susi, Michal Otyepka, Radek Zbořil
Published in: ACS Nano, 12/12, 2018, Page(s) 12847-12859, ISSN 1936-0851
Publisher: American Chemical Society
DOI: 10.1021/acsnano.8b08052

Engineering single-atom dynamics with electron irradiation

Author(s): Cong Su, Mukesh Tripathi, Qing-Bo Yan, Zegao Wang, Zihan Zhang, Christoph Hofer, Haozhe Wang, Leonardo Basile, Gang Su, Mingdong Dong, Jannik C. Meyer, Jani Kotakoski, Jing Kong, Juan-Carlos Idrobo, Toma Susi, Ju Li
Published in: Science Advances, 5/5, 2019, Page(s) eaav2252, ISSN 2375-2548
Publisher: American Association for the Advancement of Science
DOI: 10.1126/sciadv.aav2252

Direct imaging of light-element impurities in graphene reveals triple-coordinated oxygen

Author(s): Christoph Hofer, Viera Skákalová, Tobias Görlich, Mukesh Tripathi, Andreas Mittelberger, Clemens Mangler, Mohammad Reza Ahmadpour Monazam, Toma Susi, Jani Kotakoski, Jannik C. Meyer
Published in: Nature Communications, 10/1, 2019, Page(s) 4570, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-019-12537-3

Microwave Energy Drives “On–Off–On” Spin‐Switch Behavior in Nitrogen‐Doped Graphene

Author(s): Giorgio Zoppellaro, Aristides Bakandritsos, Jiří Tuček, Piotr Błoński, Toma Susi, Petr Lazar, Zdeněk Bad'ura, Tomáš Steklý, Ariana Opletalová, Michal Otyepka, Radek Zbořil
Published in: Advanced Materials, 31/37, 2019, Page(s) 1902587, ISSN 0935-9648
Publisher: United Nations Industrial Developement Organization
DOI: 10.1002/adma.201902587

Quantifying transmission electron microscopy irradiation effects using two-dimensional materials

Author(s): Toma Susi, Jannik C. Meyer, Jani Kotakoski
Published in: Nature Reviews Physics, 1/6, 2019, Page(s) 397-405, ISSN 2522-5820
Publisher: Springer Nature
DOI: 10.1038/s42254-019-0058-y

Chemistry at graphene edges in the electron microscope

Author(s): Gregor T. Leuthner; Toma Susi; Clemens Mangler; Jannik C. Meyer; Jani Kotakoski
Published in: 2D Materials, 8, 2021, Page(s) 035023, ISSN 2053-1583
Publisher: Institute of Physics Publishing
DOI: 10.1088/2053-1583/abf624

Interferometric 4D-STEM for Lattice Distortion and Interlayer Spacing Measurements in Bilayer and Trilayer Two-dimensional Materials

Author(s): Zachman, Michael J; Madsen, Jacob; Zhang, Xiang; Ajayan, Pulickel M; Susi, Toma; Chi, Miaofang
Published in: Small, 17 / 28, 2021, Page(s) 2170142, ISSN 1613-6810
Publisher: Wiley - V C H Verlag GmbbH & Co.
DOI: 10.1002/smll.202170142

Single Indium Atoms and Few-Atom Indium Clusters Anchored onto Graphene via Silicon Heteroatoms.

Author(s): Kenan Elibol; Kenan Elibol; Clemens Mangler; David D. O'Regan; Kimmo Mustonen; Dominik Eder; Jannik C. Meyer; Jannik C. Meyer; Jani Kotakoski; Richard G. Hobbs; Toma Susi; Bernhard C. Bayer; Bernhard C. Bayer
Published in: ACS Nano, 15 / 9, 2021, Page(s) 14373–14383, ISSN 1936-0851
Publisher: American Chemical Society
DOI: 10.1021/acsnano.1c03535