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DynaTweezers: Elucidating the Molecular Mechanisms of Bacterial Gene Silencing using Tethered Particles and Optical Tweezing

Objective

Antimicrobial-resistance is a growing concern in modern medicine. The spread of antibiotic resistant genes, both within bacteria species and between species, is greatly accelerated by horizontal gene-transfer. In intestinal bacteria, a major pool of antimicrobial resistance, the impact of foreign acquired DNA is modulated by H-NS proteins that recognize and silence its expression. I propose to investigate the molecular mechanism of gene silencing by H-NS and related co-regulatory proteins at a single molecular level. With the understanding of the underlying mechanisms, we may enable the development of medicines that revert or suppress the expression of antimicrobial-resistant genes.

I plan to investigate the silencing mechanism of H-NS using a combination of dynamic Tethered Particle Motion and axial Optical Tweezers. These techniques allow me to characterize the repeated transcription of individual DNA strands in high detail under a variety of external conditions and under applied forces. Using these techniques, I can systematically study how transcription is affected by stalling of the transcription complex, loop formation and promotor occlusion. My experience in biophysical measurement techniques, in combination with the high performance optical tweezer expertise and an established network of H-NS research in Toronto enable the proposed research in a unique and powerful way.

Fields of science (EuroSciVoc)

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Programme(s)

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Topic(s)

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Funding Scheme

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MSCA-IF-GF - Global Fellowships

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Call for proposal

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(opens in new window) H2020-MSCA-IF-2017

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Coordinator

TECHNISCHE UNIVERSITEIT EINDHOVEN
Net EU contribution

Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.

€ 228 421,80
Address
GROENE LOPER 3
5612 AE Eindhoven
Netherlands

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Region
Zuid-Nederland Noord-Brabant Zuidoost-Noord-Brabant
Activity type
Higher or Secondary Education Establishments
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Total cost

The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.

€ 228 421,80

Partners (1)

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