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Super-Resolution Imaging and Mapping of Epigenetic Modifications

Objective

Epigenetic marks are posttranslational modifications of chromatin that act as gene regulators. Although every cell-type contains the same DNA sequence, the epigenetic marks dictate specific function of each cell-type. Epigenetic modifications are both heritable and dynamic, and can be treated enzymatically to reverse. The dynamic marks sometimes lead to aberrant gene regulation in cells, causing diseases such as cancer, Alzheimer’s, and diabetes. Therefore, epigenetic state of individual genes can be used to identify the aberrant genes to reverse them.

In this project, a novel assay for simultaneous identification of epigenetic marks and their genomic position is proposed. State-of-the-art DNA-PAINT super-resolution microscopy, developed by Prof. Jungmann, in combination with immunofluorescence in situ hybridization (iFISH) will be used to identify the epigenetic marks in human cells with very high precision (<5 nm). The novelty of this assay is that, for the first time, it will allow to read the epigenetic marks, their genomic and 3D position in the nucleus simultaneously, for precise mapping of the epigenetic state of genes in individual cells. The assay can be used as a tool to identify aberrant marks in cells for diagnosing diseases caused by these modifications. Therefore, it has a high potential for both research in biotechnology and diagnostics.

Fields of science (EuroSciVoc)

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Programme(s)

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Topic(s)

Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.

Funding Scheme

Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.

MSCA-IF-EF-ST - Standard EF

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Call for proposal

Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.

(opens in new window) H2020-MSCA-IF-2017

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Coordinator

MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV
Net EU contribution

Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.

€ 171 460,80
Address
HOFGARTENSTRASSE 8
80539 MUNCHEN
Germany

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Region
Bayern Oberbayern München, Kreisfreie Stadt
Activity type
Research Organisations
Links
Total cost

The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.

€ 171 460,80
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