Deliverables Websites, patent fillings, videos etc. (2) RNAct website and social media networks online The RNAct website and social media channels are set up and working. Online database for RRM sequences, conformations, and interactions The database describing all the public and projectrelated information regarding RRM sequences conformations and interactions that can be made public at this point will be made available to the scientific community Documents, reports (5) Supervisory board The Management and Supervisory board members, as well as subcommittee managers, are officially appointed and installed, with the first supervisory board meeting taken place. The supervisory board will consist of the following members: The network coordinator and the deputy coordinator: - Wim Vranken (network coordinator, VUB) - Michael Sattler (deputy coordinator, HMGU) The beneficiaries: - Isaure Chauvot de Beauchene (CNRS) - Guillermo Rodrigo (CSIC) - Karl Andersson (RV) - Tommaso Martelli (GIO) - Ulrich Rant (DBS) The partners: - André Matagne (ULg) - Malika Smail-Tabbone (UL) - Helena Danielson (UU) - Marco Fragai (UF) - Camelo Lópeza (UPV) - Martin Zacharias (TUM) - The to-be-appointed program manager - One of the RNAct ESRs (to be selected by their ESR peers) - Up to 3 external members (to be appointed) Advertising of all ESR positions All ESR positions will be advertised by the start of the project Dedicated RNAct industry workshop for exploitation of results A report describing the dedicated industry workshop where we explore the exploitation of the results Possible exploitation leads identified for beneficiaries in the project will only be included if they are considered for public use All RNAct 7-monthly newsletters published All RNAct newsletters every 7 months have been prepared and published in time All annual agendas of outreach activities prepared and distributed The outreach activity agendas for months 4 14 24 and 34 were prepared and distributed on time This deliverable is for all reports but will only be provided after the final outreach activity agenda See deliverable D64 for halfterm and final reports on their impact Demonstrators, pilots, prototypes (1) Tool for interpretation of RRMs in biophysical space An integrated software tool will be created and made available that will link the sequence-based 'biophysical space' predictions from the Vranken group to RRM behaviour, such as RNA binding. Publications Peer reviewed articles (6) Identification and Characterization of an RRM-Containing, RNA Binding Protein in Acinetobacter baumannii Author(s): Caterina Ciani; Anna Pérez-Ràfols; Isabelle Bonomo; Mariachiara Micaelli; Alfonso Esposito; Chiara Zucal; Romina Belli; Vito Giuseppe D’Agostino; Irene Bianconi; Vito Calderone; Linda Cerofolini; Orietta Massidda; Michael Bernard Whalen; Marco Fragai; Alessandro Provenzani Published in: Biomolecules, Issue 32, 2022, ISSN 2218-273X Publisher: MDPI DOI: 10.3390/biom12070922 b2bTools: online predictions for protein biophysical features and their conservation Author(s): Luciano Porto Kagami, Gabriele Orlando, Daniele Raimondi, Francois Ancien, Bhawna Dixit, Jose Gavaldá-García, Pathmanaban Ramasamy, Joel Roca-Martínez, Konstantina Tzavella, Wim Vranken Published in: Nucleic Acids Research, Issue 31 May 2021, 2021, ISSN 0305-1048 Publisher: Oxford University Press DOI: 10.1093/nar/gkab425 Gene regulation by a protein translation factor at the single-cell level Author(s): Roswitha Dolcemascolo; Lucas Goiriz; Roser Montagud-Martínez; Guillermo Rodrigo Published in: PLOS Computational BIology, Issue 10, 2022, ISSN 1553-734X Publisher: Public Library of Science DOI: 10.5281/zenodo.7224967 Online biophysical predictions for SARS-CoV-2 proteins Author(s): Luciano Kagami, Joel Roca-Martínez, Jose Gavaldá-García, Pathmanaban Ramasamy, K. Anton Feenstra, Wim F. Vranken Published in: BMC Molecular and Cell Biology, Issue 22/1, 2021, ISSN 2661-8850 Publisher: BioMed Central Ltd. DOI: 10.1186/s12860-021-00362-w Deciphering the RRM-RNA recognition code: A computational analysis Author(s): Roca-Martínez, Joel; Dhondge, Hrishikesh; Sattler, Michael; Vranken, Wim F. Published in: PLOS Computational Biology, Issue 24, 2023, ISSN 1553-734X Publisher: Public Library of Science DOI: 10.1371/journal.pcbi.1010859 Challenges in describing the conformation and dynamics of proteins with ambiguous behavior Author(s): Roca-Martínez, Joel; Lazar, Tamas; Gavaldá-García, Jose; Bickel, David; Pancsa, Rita; Dixit, Bhawna; Tzavella, Konstantina; Ramasamy, Pathmanaban; Sanchez-Fornaris, Maite; Grau, Isel; Vranken, Wim Published in: Frontiers in Molecular Biosciences, 2022, ISSN 2296-889X Publisher: Frontiers Media S.A. DOI: 10.3389/fmolb.2022.959956 Searching for OpenAIRE data... There was an error trying to search data from OpenAIRE No results available
