Global views of cell type specification and differentiation

Project Information

CellularBiographies

Grant agreement ID: 834788

DOI

10.3030/834788

Project closed

EC signature date 18 September 2019

Start date 1 January 2020

End date 31 December 2025

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 2 411 440,00

EU contribution

€ 2 411 440,00

Coordinated by

UNIVERSITAT BASEL
Switzerland

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Other (2)

Dissecting the regulatory logic of specification and differentiation during vertebrate embryogenesis

Author(s): Jialin Liu, Sebastian M. Castillo-Hair, Lucia Y. Du, Yiqun Wang, Adam N. Carte, Mariona Colomer-Rosell, Christopher Yin, Georg Seelig, Alexander F. Schier
Published in: Biorxiv, 2026
Publisher: Cold Spring Harbor Laboratory Press
DOI: 10.1101/2024.08.27.609971

Gene module reconstruction elucidates cellular differentiation processes and the regulatory logic of specialized secretion

Author(s): Yiqun Wang, Jialin Liu, Lucia Y Du, Jannik L Wyss, Jeffrey A Farrell, Alexander F Schier
Published in: Biorxiv, 2026
Publisher: openRxiv
DOI: 10.1101/2023.12.29.573643

Peer reviewed articles (5)

Gene family evolution underlies cell type diversification in the hypothalamus of teleosts

Author(s): Maxwell E.R. Shafer, Ahilya N. Sawh, Alexander F. Schier
Published in: Nature Ecology Evolution, 2026, ISSN 2397-334X
Publisher: Springer
DOI: 10.1101/2020.12.13.414557

The lives of cells, recorded

Author(s): Amjad Askary, Wei Chen, Junhong Choi, Lucia Y. Du, Michael B. Elowitz, James A. Gagnon, Alexander F. Schier, Sophie Seidel, Jay Shendure, Tanja Stadler, Martin Tran
Published in: Nature Reviews Genetics, Issue 26, 2025, Page(s) 203-222, ISSN 1471-0056
Publisher: Nature Publishing Group
DOI: 10.1038/s41576-024-00788-w

Whole-embryo spatial transcriptomics at subcellular resolution from gastrulation to organogenesis

Author(s): Wan, Y., El Kholtei, J., Jenie, I., Colomer-Rosell, M., Liu, J., Navajas Acedo, J., Du, L.Y., Codina-Tobias, M., Wang, M., Zheng, W., Lin, E., Chuang, T.-H.., Mayseless, O., Sawh, A., Mango, S.E., Yu, G., Bintu, B. and Schier, A.F.
Published in: Science, 2026, ISSN 0036-8075
Publisher: American Association for the Advancement of Science

Gene module reconstruction identifies cellular differentiation processes and the regulatory logic of specialized secretion in zebrafish

Author(s): Yiqun Wang, Jialin Liu, Lucia Y. Du, Jannik L. Wyss, Jeffrey A. Farrell, Alexander F. Schier
Published in: Developmental Cell, Issue 60, 2026, Page(s) 581-598.e9, ISSN 1534-5807
Publisher: Cell Press
DOI: 10.1016/j.devcel.2024.10.015

Emergence of Neuronal Diversity during Vertebrate Brain Development

Author(s): Bushra Raj, Jeffrey A. Farrell, Jialin Liu, Jakob El Kholtei, Adam N. Carte, Joaquin Navajas Acedo, Lucia Y. Du, Aaron McKenna, Đorđe Relić, Jessica M. Leslie, Alexander F. Schier
Published in: Neuron, Issue 108/6, 2020, Page(s) 1058-1074.e6, ISSN 0896-6273
Publisher: Cell Press
DOI: 10.1016/j.neuron.2020.09.023