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Mapping and modulating integrin mediated interactions

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Publications

The IntAct database: efficient access to fine-grained molecular interaction data

Author(s): Noemi del Toro, Anjali Shrivastava, Eliot Ragueneau, Birgit Meldal, Colin Combe, Elisabet Barrera, Livia Perfetto, Karyn How, Prashansa Ratan, Gautam Shirodkar, Odilia Lu, Bálint Mészáros, Xavier Watkins, Sangya Pundir, Luana Licata, Marta Iannuccelli, Matteo Pellegrini, Maria Jesus Martin, Simona Panni, Margaret Duesbury, Sylvain D Vallet, Juri Rappsilber, Sylvie Ricard-Blum, Gianni Cesareni,
Published in: Nucleic Acids Research, 50(D1), 2022, Page(s) D648–D653, ISSN 1362-4962
Publisher: Oxford University Press
DOI: 10.1093/nar/gkab1006

Computational resources for identifying and describing proteins driving liquid-liquid phase separation.

Author(s): Pancsa R, Vranken W, Mészáros B
Published in: Briefngs in Bioinformatics, 22(5), 2021, Page(s) 1–20, ISSN 1467-5463
Publisher: Oxford University Press
DOI: 10.1093/bib/bbaa408

The Eukaryotic Linear Motif resource: 2022 release

Author(s): Manjeet Kumar, Sushama Michael, Jesús Alvarado-Valverde, Bálint Mészáros, Hugo Sámano‐Sánchez, András Zeke, Laszlo Dobson, Tamas Lazar, Mihkel Örd, Anurag Nagpal, Nazanin Farahi, Melanie Käser, Ramya Kraleti, Norman E Davey, Rita Pancsa, Lucía B Chemes, and Toby J Gibson
Published in: Nucleic Acids Research, 50(D1), 2022, Page(s) D497–D508, ISSN 1362-4962
Publisher: Oxford University Press
DOI: 10.1093/nar/gkab975

Short linear motif candidates in the cell entry system used by SARS-CoV-2 and their potential therapeutic implications

Author(s): Bálint Mészáros, Hugo Sámano-Sánchez, Jesús Alvarado-Valverde, Jelena Čalyševa, Elizabeth Martínez-Pérez, Renato Alves, Denis C. Shields, Manjeet Kumar, Friedrich Rippmann, Lucía B. Chemes, Toby J. Gibson
Published in: Science Signaling, 14/665, 2021, Page(s) eabd0334, ISSN 1937-9145
Publisher: American Association for the Advancement of Science
DOI: 10.1126/scisignal.abd0334

PSINDB: the postsynaptic protein-protein interaction database

Author(s): Zsofia E Kalman, Dániel Dudola, Bálint Mészáros, Zoltán Gáspári, Laszlo Dobson
Published in: Database, 2022, Page(s) baac007, ISSN 1758-0463
Publisher: Oxford University Press
DOI: 10.1093/database/baac007

ECO: the Evidence and Conclusion Ontology, an update for 2022.

Author(s): Nadendla S, Jackson R, Munro J, Quaglia F, Mészáros B, Olley D, Hobbs ET, Goralski SM, Chibucos M, Mungall CJ, Tosatto SCE, Erill I, Giglio MG
Published in: Nucleic Acids Res., 50(D1), 2022, Page(s) D1515–D1521, ISSN 1362-4962
Publisher: Oxford Academics
DOI: 10.1093/nar/gkab1025

DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation.

Author(s): Quaglia F, Mészáros B, Salladini E, Hatos A, Pancsa R, Chemes LB, Pajkos M, Lazar T, Peña-Díaz S, Santos J, Ács V, Farahi N, Fichó E, Aspromonte MC, Bassot C, Chasapi A, Davey NE, Davidović R, Dobson L, Elofsson A, Erdős G, Gaudet P, Giglio M, Glavina J, Iserte J, Iglesias V, Kálmán Z, Lambrughi M, Leonardi E, Longhi S, Macedo-Ribeiro S, Maiani E, Marchetti J, Marino-Buslje C, Mészáros
Published in: Nuclei Acids Research, 50(D1), 2021, Page(s) D480-D487, ISSN 1362-4962
Publisher: Oxford Academics
DOI: 10.1093/nar/gkab1082

A structural biology community assessment of AlphaFold 2 applications

Author(s): Mehmet Akdel, Douglas E V Pires, Eduard Porta Pardo, Jürgen Jänes, Arthur O Zalevsky, Bálint Mészáros, Patrick Bryant, Lydia L. Good, Roman A Laskowski, Gabriele Pozzati, Aditi Shenoy, Wensi Zhu, Petras Kundrotas, Victoria Ruiz Serra, Carlos H M Rodrigues, Alistair S Dunham, David Burke, Neera Borkakoti, Sameer Velankar, Adam Frost, Kresten Lindorff-Larsen, Alfonso Valencia, Sergey Ovchinniko
Published in: bioRxiv, 2021, ISSN 2692-8205
Publisher: bioRxiv
DOI: 10.1101/2021.09.26.461876