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Co-designed Citizen Observatories Services for the EOS-Cloud

Deliverables

General purpose integration platform

This type of platforms will allow users to interact simultaneously with from different sources of data to create derived services. The base of the development will be a generic purpose platform that can be customized according specific needs.

Experts portal for biodiversity data validation

This deliverable will be an example of how a generic interactive platform service may be adapted to develop a data quality platform by the Experts Validation for biodiversity observations

Platform for interactive pre-processing camera trap images

The service to develop will be able to 1 automatically filter most if not all of the unwanted pictures and 2 propose the species name The idea is to create a GUI that use the outputs generated in Task 35 that allows users to visualize the results and if they accept the suggestion classification from the system the picture is uploaded to any of the chosen biodiversity COs iSpot Artportalen Natusfera with the proposed identification the uploading process will be using an interoperable API defined in WP2 Some of the data retrieved produced by this service will be used for training in Task 35

Identification of and engagement with projects of interest

OU will create a database that will be shared in the project web.

Project Video

A promotional video of the project to be shared in the project website and other identified media channels

Searching for OpenAIRE data...

Publications

Overview of LifeCLEF location-based species prediction task 2020 (GeoLifeCLEF)

Author(s): Deneu, Benjamin; Lorieul, Titouan; Cole, Elijah; Servajean, Maximilien; Botella, Christophe; Bonnet, Pierre; Joly, Alexis
Published in: CLEF 2020 - 11th International Conference of the Cross-Language Evaluation Forum for European Languages, 2020, ISSN 1613-0073
Publisher: CEUR-WS

Customized e-floras: How to develop your own project on the Pl@ntNet platform

Author(s): A Affouard, M Chouet, JC Lombardo, H Gresse, H Goëau, T Lorieul, ...
Published in: TDWG 2021: Biodiversity Information Science and Standards, 2021
Publisher: Pensoft
DOI: 10.3897/biss.5.73857

How Do Deep Convolutional SDM Trained on Satellite Images Unravel Vegetation Ecology?

Author(s): B Deneu, A Joly, P Bonnet, M Servajean, F Munoz
Published in: ICPR 2020 - International Conference on Pattern Recognition - workshops and challenges, February 2021, 2021, Page(s) N/A, ISBN 978-3-030-68780-9
Publisher: Springer
DOI: 10.1007/978-3-030-68780-9_15

Overview of GeoLifeCLEF 2021: Predicting species distribution from 2 million remote sensing images

Author(s): T Lorieul, E Cole, B Deneu, M Servajean, P Bonnet, A Joly
Published in: CLEF 2021 Working Notes, 2021
Publisher: CEUR-WS

Overview of LifeCLEF Plant Identification task 2020

Author(s): Goëau, Hervé; Bonnet, Pierre; Joly, Alexis
Published in: CLEF 2020 - Conference and labs of the Evaluation Forum, The CLEF Initiative, Sep 2020, Thessalonique, Greece, 1, 2020, ISSN 1613-0073
Publisher: CEUR-WS

Overview of LifeCLEF 2021: An Evaluation of Machine-Learning Based Species Identification and Species Distribution Prediction

Author(s): A Joly, H Goëau, E Cole, S Kahl, L Picek, H Glotin, B Deneu, M Servajean, ...
Published in: CLEF 2021: Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2021, ISBN 978-3-030-85251-1
Publisher: Springer
DOI: 10.1007/978-3-030-85251-1_24

ICTs, data and vulnerable people: a guide for citizens

Author(s): Alexandra Castañeda, Andreas Matheus, Andrzej Klimczuk, Anna Berti Suman, Annelies Duerinckx, Christoforos Pavlakis, Corelia Baibarac-Duignan, Elisabetta Broglio, Federico Caruso, Gefion Thuermer, Helen Feord, Janice Ansine, Jaume Piera, Karen Soacha, Katerina Zourou, Katherin Wagenknecht, Katrin Vohland, Linda Freyburg, Marcel Leppée, Marta Camara Oliveira, Mieke Sterken, Tim Woods
Published in: PANELFIT Project Workshop, Berlin, March 2020, 2021
Publisher: UPV-EHU
DOI: 10.13140/rg.2.2.22773.70882

Pl@ntNet-300K: a plant image dataset with high label ambiguity and a long-tailed distribution

Author(s): C Garcin, A Joly, P Bonnet, JC Lombardo, A Affouard, M Chouet, ...
Published in: NeurIPS 2021 - 35th Conference on Neural Information Processing Systems, 2021
Publisher: Neurips proceedings
DOI: 10.5281/zenodo.5645731

Participation of LIRMM / Inria to the GeoLifeCLEF 2020 challenge

Author(s): Deneu, Benjamin; Servajean, Maximilien; Bonnet, Pierre; Munoz, François; Joly, Alexis
Published in: CLEF 2020 - 11th International Conference of the Cross-Language Evaluation Forum for European Languages, 2020, ISSN 1613-0073
Publisher: CEUR-WS

LifeCLEF 2021 Teaser: Biodiversity Identification and Prediction Challenges

Author(s): A Joly, H Goëau, E Cole, S Kahl, L Picek, H Glotin, B Deneu, M Servajean, ...
Published in: ECIR 2021: Advances in Information Retrieval, N/A, 2021, Page(s) pp 601-607, ISBN 978-3-030-72240-1
Publisher: Springer
DOI: 10.1007/978-3-030-72240-1_70

Design and Development of Interoperable Cloud Sensor Services to Support Citizen Science Projects

Author(s): Henning Bredel, SImon Jirka, Joan Masó Pau, and Jaume Piera
Published in: EGU General Assembly 2020, June 2020, 2020
Publisher: Copernicus
DOI: 10.5194/egusphere-egu2020-13338

Overview of PlantCLEF 2021: cross-domain plant identification

Author(s): H Goëau, P Bonnet, A Joly
Published in: CLEF 2021 Working Notes, 2021
Publisher: CEUR-WS

Contribution citoyenne au suivi de la flore d'un parc national français, un exemple remarquable à l'échelle du Parc national des Cévennes

Author(s): Bonnet, Pierre; Goëau, Hervé; Hopkins, Frantz; Véla, Errol; Sahl, Amandine; Affouard, Antoine; Lombardo, Jean-Christophe; Champ, Julien; Hugo, Gresse; Joly, Alexis
Published in: "Carnets Botaniques, Société Botanique d'Occitanie, 2020, pp.1-9. ⟨10.34971/zaz0-n247⟩", 1-9, 2020, ISSN 2727-6287
Publisher: Société botanique d’Occitanie (SBOcc)
DOI: 10.34971/zaz0-n247

AI Naturalists Might Hold the Key to Unlocking Biodiversity Data in Social Media Imagery

Author(s): Tom A. August, Oliver L. Pescott, Alexis Joly, Pierre Bonnet
Published in: Patterns, 1/7, 2020, Page(s) 100116, ISSN 2666-3899
Publisher: Elsevier
DOI: 10.1016/j.patter.2020.100116

Pl@ntNet Services, a Contribution to the Monitoring and Sharing of Information on the World Flora

Author(s): Pierre Bonnet, Julien Champ, Hervé Goëau, Fabian-Robert Stöter, Benjamin Deneu, Maximilien Servajean, Antoine Affouard, Jean-Christophe Lombardo, Oleksandra Levchenko, Hugo Gresse, Alexis Joly
Published in: Biodiversity Information Science and Standards, 4, 2020, Page(s) e58933, ISSN 2535-0897
Publisher: """Biodiversity Information Science and Standards website"""
DOI: 10.3897/biss.4.58933

Mapping citizen science contributions to the UN sustainable development goals

Author(s): Dilek Fraisl, Jillian Campbell, Linda See, Uta Wehn, Jessica Wardlaw, Margaret Gold, Inian Moorthy, Rosa Arias, Jaume Piera, Jessica L. Oliver, Joan Masó, Marianne Penker, Steffen Fritz
Published in: Sustainability Science, 15/6, 2020, Page(s) 1735-1751, ISSN 1862-4065
Publisher: Springer Verlag
DOI: 10.1007/s11625-020-00833-7

Citizen Science Monitoring for Sustainable Development Goal Indicator 6.3.2 in England and Zambia

Author(s): Frank C Nyoni; C. G. E. van Noordwijk; Steven Loiselle; Stuart Warner; Isabel J Bishop
Published in: https://www.preprints.org/manuscript/202011.0067/v1, 12(24), 2020, Page(s) 1-15, ISSN 2071-1050
Publisher: MDPI Open Access Publishing
DOI: 10.20944/preprints202011.0067.v1

How citizen scientists contribute to monitor protected areas thanks to automatic plant identification tools

Author(s): Pierre Bonnet, Alexis Joly, Jean‐Michel Faton, Susan Brown, David Kimiti, Benjamin Deneu, Maximilien Servajean, Antoine Affouard, Jean‐Christophe Lombardo, Laura Mary, Christel Vignau, François Munoz
Published in: Ecological Solutions and Evidence, 1/2, 2020, ISSN 2688-8319
Publisher: John Wiley & Sons Ltd on behalf of British Ecological Society
DOI: 10.1002/2688-8319.12023

Protecting small populations of rare species. Case study on Dactylorhiza viridis (Orchidaceae) in Fancott Woods and Meadows SSSI, Bedfordshire, UK

Author(s): Irina Tatarenko, Mike Dodd, Hilary Wallace, Graham Bellamy, Andy Fleckney
Published in: Nature Conservation Research, 5/Suppl.1, 2020, Page(s) 165-171, ISSN 2500-008X
Publisher: Nature Conservation Research
DOI: 10.24189/ncr.2020.028

Convolutional neural networks improve species distribution modelling by capturing the spatial structure of the environment

Author(s): B Deneu, M Servajean, P Bonnet, C Botella, F Munoz, A Joly
Published in: PLOS Computational Biology, 2021, Page(s) pp 601-607, ISSN 1553-734X
Publisher: Public Library of Science
DOI: 10.1371/journal.pcbi.1008856

Overview of LifeCLEF 2020: A System-Oriented Evaluation of Automated Species Identification and Species Distribution Prediction

Author(s): Alexis Joly, Hervé Goëau, Stefan Kahl, Benjamin Deneu, Maximillien Servajean, Elijah Cole, Lukáš Picek, Rafael Ruiz de Castañeda, Isabelle Bolon, Andrew Durso, Titouan Lorieul, Christophe Botella, Hervé Glotin, Julien Champ, Ivan Eggel, Willem-Pier Vellinga, Pierre Bonnet, Henning Müller
Published in: Experimental IR Meets Multilinguality, Multimodality, and Interaction - 11th International Conference of the CLEF Association, CLEF 2020, Thessaloniki, Greece, September 22–25, 2020, Proceedings, 12260, 2020, Page(s) 342-363, ISBN 978-3-030-58218-0
Publisher: Springer International Publishing
DOI: 10.1007/978-3-030-58219-7_23

Citizen Science in Europe

Author(s): Vohland, K., Göbel, C., Balázs, B., Butkevičienė, E., Daskolia, M., Duží, B., Hecker, S., Manzoni, M. & Schade, S.
Published in: 2021, Page(s) pp 35-53, ISBN 978-3-030-58277-7
Publisher: Springer
DOI: 10.1007/978-3-030-58278-4_3

LifeCLEF 2020 Teaser: Biodiversity Identification and Prediction Challenges

Author(s): Alexis Joly, Hervé Goëau, Stefan Kahl, Christophe Botella, Rafael Ruiz De Castaneda, Hervé Glotin, Elijah Cole, Julien Champ, Benjamin Deneu, Maximillien Servajean, Titouan Lorieul, Willem-Pier Vellinga, Fabian-Robert Stöter, Andrew Durso, Pierre Bonnet, Henning Müller
Published in: Advances in Information Retrieval - 42nd European Conference on IR Research, ECIR 2020, Lisbon, Portugal, April 14–17, 2020, Proceedings, Part II, 12036, 2020, Page(s) 542-549, ISBN 978-3-030-45441-8
Publisher: Springer International Publishing
DOI: 10.1007/978-3-030-45442-5_70