Objective
Research objectives and content
HMG-D is one the Drosophila counterparts of the mammalian HMG- 1 and 2 proteins. These proteins are abundant and their function is not clearly determined. HMG-D comprises a single HMG domain, which is a DNA binding motif, followed by a basic region and a c-terminal acidic tail. The acidic tail of HMG-D confers the selectivity for deformed DNA structures and therefore modulates the binding of HMG-D to DNA. By NMR spectroscopy studies we will determine how the acidic tail works. We expect that the acidic tail modulates the structure of HMG-D by interacting with the HMG domain and therefore modulates its DNA binding. We suggest that the modification by phosphorylation of the acidic tail could provide a way for changing DNA binding affinity in vivo. The modifications of HMG-D and the DNA binding properties of the modified protein will be investigated. Finally we propose to test whether HMG-D acts as a DNA chaperone in the assembly of nucleosomes and higher DNA structures.
Training content (objective, benefit and expected impact)
This project will give me some training in: - NMR spectroscopy, protein structure. - biochemistry of proteins, purification of proteins from Drosophila embryos, in investigating the modification of proteins. - chromatin structure I will acquire some more experience in DNA-protein interaction and in molecular biology.
Links with industry / industrial relevance (22)
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences biological sciences genetics DNA
- natural sciences biological sciences biochemistry biomolecules proteins
- natural sciences physical sciences optics spectroscopy absorption spectroscopy
- medical and health sciences clinical medicine embryology
- natural sciences biological sciences molecular biology
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Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
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Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Coordinator
CB2 2QH Cambridge
United Kingdom
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.