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Content archived on 2024-06-17

Computational chemistry and enzymology: investigation of the camp- dependent protein kinase and integration of computational methods into a single scheme

Objective

Elucidating how enzymes enhance the rate of the reactions that they catalyze is a major goal of contemporary biochemistry and it is an area in which computational and theoretical techniques can make a major contribution. In this regard, the present research project pursues a twofold goal. On one hand, we propose to study the catalytic mechanism of the cAMP-dependent protein kinase whose catalytic subunit is a good prototype for this large family of enzymes. We will use a broad array of computational techniques that include electrostatic calculations, docking analyses, energy optimizations, molecular dynamics simulations and free energy calculations. On the other hand, we will formulate and implement a new computational protocol that efficiently combines different theoretical approaches in a wide scheme. The ultimate goal of this research is to develop a computational tool that would allow scientists with a basic background in molecular modeling to go, as far as they want, in the computational investigation of enzyme catalysis.

Fields of science (EuroSciVoc)

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Topic(s)

Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.

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Call for proposal

Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.

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Funding Scheme

Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.

RGI - Research grants (individual fellowships)

Coordinator

COMMISSARIAT A L'ENERGIE ATOMIQUE
EU contribution
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Address
Rue Jules Horowitz, 41
38027 GRENOBLE
France

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Total cost

The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.

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