BioNetIllustration: User centric illustrations of biological networks

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Overlap-free labeling of clustered networks based on Voronoi tessellation

Author(s): Hsiang-Yun Wu, Shigeo Takahashi, Rie Ishida
Published in: Journal of Visual Languages & Computing, Issue Volume 44, 2017, ISSN 1045-926X
Publisher: Academic Press
DOI: 10.1016/j.jvlc.2017.09.008

Exploring the limits of complexity: A survey of empirical studies on graph visualisation

Author(s): Vahan Yoghourdjian, Daniel Archambault, Stephan Diehl, Tim Dwyer, Karsten Klein, Helen C. Purchase, Hsiang-Yun Wu
Published in: Visual Informatics, Issue 2/4, 2018, Page(s) 264-282, ISSN 2468-502X
Publisher: Elsevier B.V.
DOI: 10.1016/j.visinf.2018.12.006

Labels on Levels: Labeling of Multi-Scale Multi-Instance and Crowded 3D Biological Environments

Author(s): David Kouril, Ladislav Cmolik, Barbora Kozlikova, Hslanc-Yun Wu, Graham Johnson, David S. Goodsell, Arthur Olson, M. Eduard Groller, Ivan Viola
Published in: IEEE Transactions on Visualization and Computer Graphics, Issue 25/1, 2019, Page(s) 977-986, ISSN 1077-2626
Publisher: Institute of Electrical and Electronics Engineers
DOI: 10.1109/tvcg.2018.2864491

Optimizing Stepwise Animation in Dynamic Set Diagrams

Author(s): Kazuyo Mizuno, Hsiang‐Yun Wu, Shigeo Takahashi, Takeo Igarashi
Published in: Computer Graphics Forum, Issue 38/3, 2019, Page(s) 13-24, ISSN 0167-7055
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/cgf.13668

Metabopolis: scalable network layout for biological pathway diagrams in urban map style

Author(s): Hsiang-Yun Wu, Martin Nöllenburg, Filipa L. Sousa, Ivan Viola
Published in: BMC Bioinformatics, Issue 20/1, 2019, ISSN 1471-2105
Publisher: BioMed Central
DOI: 10.1186/s12859-019-2779-4

Lost in Translation: Alignment of Mental Representations for Visual Analytics

Author(s): Daniel Archambault, Jessie Kennedy, Tatiana von Landesberger, Mark McCann, Fintan McGee, Benjamin Renoust, Hsiang-Yun Wu
Published in: Reimagining the Mental Map and Drawing Stability (NII Shonan Meeting Seminar 127), 2018
Publisher: Shonan Seminar

Mapifying the Genome

Author(s): Radu Jianu, Martin Krzywinski, Luana Micallef, Hsiang-Yun Wu
Published in: Scalable Set Visualizations (Dagstuhl Seminar 17332), 2018
Publisher: Dagstuhl Seminar

From Cells to Atoms - Biological Information Visualization (in Chinese)

Author(s): Hsiang-Yun Wu, Haichao Miao, Ivan Viola
Published in: 2019
Publisher: China Computer Federation

A Visual Comparison of Hand-Drawn and Machine-Generated Human Metabolic Pathways

Author(s): Hsiang-Yun Wu, Martin Nöllenburg, Ivan Viola
Published in: 2019
Publisher: Eurographics

Graph Models for Biological Pathway Visualization: State of the Art and Future Challenges

Author(s): Hsiang-Yun Wu, Martin No ̈llenburg, Ivan Viola
Published in: 2019
Publisher: IEEE VIS Workshop

A Survey on Computing Schematic Network Maps: The Challenge to Interactivity

Author(s): Hsiang-Yun Wu, Benjamin Niedermann, Shigeo Takahashi, Martin Nöllenburg
Published in: The 2nd Schematic Mapping Workshop, 2019
Publisher: The 2nd Schematic Mapping Workshop

Interactive Exploded Views for Molecular Structures

Author(s): Maximillian Sbardellati, Haichao Miao, Hsiang-Yun Wu, Meister Eduard Gröller, Ivan Barisic, Ivan Viola
Published in: Proceedings of the 9th Eurographics Workshop on Visual Computing for Biology and Medicine, 2019
Publisher: Eurographics

The Travel of a Metabolite

Author(s): Hsiang-Yun Wu, Martin Nöllenburg, Ivan Viola
Published in: PacificVis 2018 Data Story Telling Contest, 2019
Publisher: PacificVis 2018 Data Story Telling Contest

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