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Decrypting the role of bacterial signals in microbial interactions to enhance Lysobacter establishment in the rhizosphere

Objective

Bacterial biocontrol agents (BCAs) are a promising alternative to chemical pesticides in sustainable agriculture. However, their use is often inconsistent in field, mainly due to the difficulty of BCAs to effectively colonize the rhizosphere and integrate in resident microbial communities. As invaders, BCAs have to face indigenous microbiota once arrived on the rhizosphere, and the establishment of interspecific interactions based on quorum sensing (QS) signals may enhance or hinder their establishment in the rhizosphere. With the objective to solve the problem of BCA inconsistency in field, our research is aimed at unveiling the response of a model BCA to main QS signals released by rhizosphere-living bacteria. To do that, we designed a straightforward working plan based on the combination of microbiology, transcriptomics and formulation technologies. We will use Lysobacter capsici AZ78 (AZ78) as model BCA and QS signals already characterized in rhizosphere-living bacteria. Firstly, we will identify main QS signaling systems included in AZ78 genome through genome mining and we will dissect the AZ78 transcriptional response to QS signals through RNA-Seq. Concurrently, we will identify bacterial strains living on tomato rhizosphere able to boost the AZ78 capacity to release antibiotics and resist UV-light, thanks to positive interactions. Finally, we will develop novel formulations of bacterial consortia (AZ78 with helper bacterial strains) incorporating also positive QS signals. The outcome of this project will be a milestone in the development of next generation BCAs relying on the interspecific interactions to favor BCA establishment in the rhizosphere. The achievement of the results will allow me to create a research group focusing on the ecology and formulations of BCAs, a topic that will meet the interest of industries investing in eco-friendly fungicides and European policy inclined to reducing the input of chemical pesticides in agriculture.

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MSCA-IF-EF-ST - Standard EF

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Call for proposal

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(opens in new window) H2020-MSCA-IF-2017

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Coordinator

UNIVERSITA DEGLI STUDI DI TRENTO
Net EU contribution

Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.

€ 168 277,20
Address
VIA CALEPINA 14
38122 Trento
Italy

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Region
Nord-Est Provincia Autonoma di Trento Trento
Activity type
Higher or Secondary Education Establishments
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Total cost

The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.

€ 168 277,20
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