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Integrating and managing services for the European Open Science Cloud

Deliverables

Final technical architecture update and interoperability guidelines update

This document will update the service architecture for the EOSC-Hub platform. This will take into account all the services coming out from the various projects and community joining EOSC-Hub. The document will also contain the latest version of the architecture and interoperability guidelines developed by the project.

D7.2 First report on Thematic Service architecture and software integration

A report describing the architectures of the first software release components and the activities completed by the communities to achieve their release.

D10.4 EOSC Hub Technical Architecture and standards roadmap v2

This document will update the service architecture for the EOSC-Hub platform. This will take into account all the services coming out from the various projects and community joining EOSC-Hub. The architecture will also cover the interaction among the services.

D9.4 Joint Digital Innovation Hub Final Results and Sustainability Plan

This is the final comprehensive report of the Joint Digital Innovation Hub and its inherent activities It provides details regarding all engagement activities key results and future plans beyond the life of the project This report will also provide the details regarding newly established experiments that were run in the second half of the project

D9.2 Joint Digital Innovation Hub Intro and Strategy

This report provides an introduction to the overall project’s Joint Digital Innovation Hub including the structure, management, technical facilities and strategy for its evolution. It will also provide the initial plans of the commercialisation activities that start in PM6.

D7.3 First report on Thematic Service exploitation

A report describing the results of the community services exploitation in terms of usage availability users feedback weak points proposals for future improvements etc

D8.2 Final report on Competence Centre key results and exploitation status and plans

Final report about the achievements of the Competence Centres and plans for evolving operating and exploiting the CC prototypespilotsservices beyond the project

D10.6 Requirements and gap analysis report v2

This document will provide a detailed an updated report about the first round of technical gap analysis taking into account all the requirements coming from WP7, WP8 and WP9. This document will also draft the proposed solution to fill the new identified gaps.

D3.3 Interim report on dissemination and exploitation of project results

This document provides an update to the key exploitable results including aspects such as the definition, value proposition, IP management, exploitation path and dissemination activities and adoption.

D5.5 2nd Report on maintenance and integration of federation and collaboration services

This report describes the work done during the second year of the project. It provides the assessment of the integration work with focus on AAI services and results, performance and availability of the services, ongoing activities and updated work plan.

D10.2 EOSC Hub Technical Roadmap v2

This document will update the Service Roadmap It will provide details about changing of services or inclusion or deletion of services in the EOSCHub catalogue with their features capabilities and information about development status

D13.4 Periodical assessment of the services

The report provides assessment and statistics of all services provided under virtual access

D10.3 EOSC Hub Technical Architecture and standards roadmap v1

This document will draft the overview of the service architecture for the EOSC-Hub platform. This will take into account all the services coming out from the various projects and community joining EOSC-Hub. The architecture will also cover the interaction among the services.

D10.5 Requirements and gap analysis report v1

This document will provide a detailed report about the first round of technical gap analysis taking into account all the requirements coming from WP7, WP8 and WP9. This document will also draft the proposed solution to fill the identified gaps.

D8.1 Report on progress, achievements and plans of the Competence Centres

Status report about the prototypes, pilots and production services that were setup by the Competence Centres, together with their further development plans to EOSC services.

D2.1 First EOSC-hub Strategy plan

A high-level description of the strategic direction and ambition of EOSC-Hub, serving as strategic guidance for the project as a whole. Additionally, it will make the project’s intentions publicly available in a transparent way.

D11.4 Second Report on training activities, infrastructure and materials

This document provides a second training activity report for WP11. It includes the list of training events, materials, datasets and deployable training environments developed by the project and available in the online catalogue.

D3.4 Final report on dissemination and exploitation of project results

This document provides a final report on the key exploitable results including aspects such as the definition, value proposition, IP management, exploitation path and dissemination activities and adoption.

D12.3 Business models and procurement: evaluation and recommendations

Final evaluation of the business models for procuring services in the EOSC with identifications of outstanding barriers and opportunities Recommendation for activities beyond the life of the project including the exploitation strategy for the results

D2.8 First Data policy recommendations

First version of a set of policies to facilitate the sharing and safe processing of both open and “restricted” data from across European research infrastructures.

D1.7 Report on EOSC-hub Service Management System

A report on implementation of integrated Service Management System (SMS) to effectively manage the delivery of services to customers.

D13.1 Periodical assessment of the services

The report provides assessment and statistics of all services provided under virtual access.

D4.2 Operational Infrastructure Roadmap

This report will summarise the steps and the timeline for the implementation of the full operations framework of the EOSC-hub infrastructure. It will describe how operations coordination will be organised and what are the main requirements for the operational tools that support the operations activities.

D5.1 Initial maintenance and integration plan for federation and collaboration services

This document provides the introduction to the collaborative services and infrastructure and outlines the roadmap for initial integration with timelines and expected technical results. It describes the current status of collaborative services and tools and foreseen integration activities and collaborative work of service providers.

D7.5 Final report on Thematic service architecture, software integration and exploitation

A report describing the architectures of the final software release components, the integration and the exploitation activities.

D6.4 Second report on the maintenance and integration of common services

Second report on the status of the common services software maintenance and integration Presentation of the updated maintenance and integration plans that covers all the tasks in WP6 The report describes the integration of software for new common services from the EOSChub service catalogue

D13.3 Periodical assessment of the services

The report provides assessment and statistics of all services provided under virtual access

D12.2 Report on business model analysis for procuring services in the EOSC

Synopsis of the unique issues associated with acquiring digital services for research in the EOSC drawing out issues eg perceived incompatibility with legal and regulatory frameworks alongside further investigation into whether cloud coins or voucher access models can be used as a legitimate mechanism to providing a longterm solution to making services available free at the point of use exploring sponsored use scenarios and suggesting terms of reference for future EOSC Central Purchasing Bodies or intermediary organisations acting as demand aggregators in the EOSC context

D11.2 Training materials about competence centre services

This report describes the training activities done during the first year of the project It includes the list of training events materials datasets and deployable training environments developed by the project and available in the online catalogue

D12.1 Procurement requirements and demand assessment

Analysis of procurement requirements, demand assessment, buying schedule of selected organisations, identification of early adopters for the procurement and purchasing framework, definition of business models suitable for the selected scenarios with identification of the related funding and payment schemes.

D2.2 Final EOSC-hub Strategy plan

Second version of the Strategy Plan, containing a high-level description of the strategic direction and ambition of EOSC-Hub, serving as strategic guidance for the project as a whole. Additionally, it will make the project’s intentions publicly available in a transparent way.

D10.1 EOSC Hub Technical Roadmap v1

This document will draft the first version of the Service Roadmap. It will provide details about each chosen service in the EOSC-Hub catalogue with their features, capabilities and information about development status.

D2.9 Final Data policy recommendations

Final version of a set of policies to facilitate the sharing and safe processing of both open and “restricted” data from across European research infrastructures.

D4.1 Operational requirements for the services in the catalogue

This document will summarise the common requirements that will be applied to the services in the EOSC-hub catalogue to be considered production, be exposed to the users, and to be integrated with the EOSC-hub operations infrastructure.

D2.6 First Service roadmap, service portfolio and service catalogue

This report presents the first version of the EOSC-Hub service roadmap, the service portfolio and the service catalogue. The document also describes the service portfolio management process established within the project.

D13.2 Periodical assessment of the services

The report provides assessment and statistics of all services provided under virtual access.

D6.2 First report on the maintenance and integration of common services

Report on the status of the common services software maintenance and adaptations according to the first maintenance and integration plans that covers the tasks 6.1, 6.2, 6.3 and T6.4. The plan for quality testing and continuous delivery will be discussed.

D3.1 EOSC-Hub Communication & Stakeholder Engagement Plan

Definition of the strategy for communicating and engaging with the internal and external stakeholders targeted by the project. The plan, a living document from M5 to project completion, will define different potential levels of engagement and outline the different communication plans for each stakeholder, including details of the action plans and implementation steps and timing. Detailed KPIs and metrics will be provided to monitor the effectiveness of the plan.

D5.3 1st Report on maintenance and integration of federation and collaboration services

This report describes the work done during the first year of the project. It provides the assessment of the initial integration work with focus on AAI services and results, performance and availability of the services, ongoing activities and updated work plan.

D3.5 Communication & Stakeholder Engagement: Final Report

This report will summarise the communication and stakeholder engagement activities executed over the project lifetime with details of the action plans, implementation, timing and impact assessment based on the defined KPIs and metrics (in D3.1).

D2.7 Final Service roadmap, service portfolio and service catalogue

This report presents the final version of the service portfolio and the service catalogue. It also presents the recommended service roadmap to evolve the service portfolio after the end of the project.

D7.4 Second Thematic Service software release

The second set of software components At this stage it is expected that all the community services are fully integrated with the EOSChub infrastructure

D6.5 Final report on the maintenance and integration of common services

Final release of a maintenance package for the common services The package addresses existing and new common services across all WP6 tasks It comprises adaptations and additionally required software components that foster the horizontal and vertical integration of the common services with federation collaborative and thematic services

D11.5 Updated training materials about common services, thematic and competence services

This document is the final training activity report for WP11. It includes the final version of the online catalogue along with the list of all the training events, materials, datasets and deployable training environments developed during the project lifetime to target the needs of data scientists.

D4.4 Capacity plans for services in the Hub Portfolio

This deliverable will collect the available usage statistics for all the services in the EOSC-hub catalogue. A capacity plan for the services in the catalogue will be provided as well, it will be based on the usage statistics and the expectations for future usage.

D5.6 Final report on the integration of federation and collaboration services

The scope of this document is the final release of collaborative services and tools. It describes the development and implementation of new features for the services and tools during the third year of the project. The report concludes the overall development for all collaborative services and tools achieved during the whole project duration and provides the final results for the whole collaborative infrastructure.

D11.1 Training materials about common services and thematic services

The document outlines the initial training plan that will be delivered during the project, and provides a first set of training contents, about each common and thematic services, that will be available in the online catalogue.

D4.3 Procedures and policies for the production infrastructure

This deliverable will provide an overview of the operational policies and procedures applicable to the services of the EOSC-hub catalogue.

D5.2 First release of federation and collaboration services and tools

The scope of this document is the first release of collaborative services and tools. It describes the development and implementation of new features for the services and tools achieved during the first year of the project.

D5.4 Second release of federation and collaboration services and tools

This report describes the work done during the second year of the project. It provides an update on assessment of the integration work and intermediate results. It includes the evaluation of the development of collaboration services and tools with focus on their integration and possible deviations from the original work plan.

D6.3 Second release of common services

Release of the second maintenance package for common services. The package addresses common services across all WP6 tasks. It comprises advanced software interoperability adaptations regarding federation and collaboration services as well as adaptations required by thematic and specialized services.

D6.1 First release of common services software

Release of the first maintenance package for common services required by the thematic and specialized services. The package addresses common services in the area of T6.1, 6.2, 6.3 and T6.4 (without B2NOTE). It comprises first software adaptations of the common services that feature horizontal and vertical interoperability.

D7.1 First Thematic Service software release

The first set of software components which are vertically integrated on top of the EOSC-hub infrastructural services provided by WP6 and WP5. The components allow to extend the community services specific of each WP7’s task, exploiting the EOSC-hub infrastructure. At this stage, it is expected that only a minor part of those services is fully integrated with the EOSC-hub, while most part of them covers only some aspects of the integration: accounting, authentication, monitoring, etc.

D1.5 Data Management Plan

A report that will specify how research publications and data will be collected, processed, monitored, catalogued, and disseminated during the project lifetime.

D1.6 Data Management Plan

A report that will specify how research publications and data will be collected processed monitored catalogued and disseminated during the project lifetime

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Publications

EOSC DIH Business Pilot Success Stories

Author(s): Holsinger, Sy, Płóciennik, Marcin, Cauhé, Elisa, Rabenda-Tomczak, Agnieszka, Arlandini, Claudio, Almeida, Samuel, & Laver, Nick.
Published in: 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.4836294

Second Working Proposal for Living Indicators to Monitor MS Progresses Towards EOSC Readiness

Author(s): Arvola, Maijastiina; Beckmann, Volker; Budroni, Paolo; Castelli, Donatella; Cavalli, Valentino; Davidson, Joy; Di Giorgio, Sara; Dovey, Matthew; Fischer, Lars; Hönegger, Lisa; Kosanovic, Biljana; Lazzeri, Emma; Matyska, Ludek; Papastamatiou, Ilias; Prnjat, Ognjen; Rasmussen, Troels; Robertson, Dale; Stoy, Lennart; Tanlongo, Federica; Toli, Eleni; Van Wezel, Jos
Published in: 5, 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.4452799

A protocol for information-driven antibody-antigen modelling with the HADDOCK2.4 webserver

Author(s): Ambrosetti, Francesco; Jandova, Zuzana; Bonvin, Alexandre M. J. J.
Published in: 5, 2020
Publisher: Cornell University

An overview of data-driven HADDOCK strategies in CAPRI rounds 38-45

Author(s): Francesco Ambrosetti; Irina S. Moreira; Irina S. Moreira; Rodrigo V. Honorato; Jörg Schaarschmidt; Jörg Schaarschmidt; Cunliang Geng; Alexandre M. J. J. Bonvin; Adrien S. J. Melquiond; Panagiotis I. Koukos; Jorge Roel-Touris; Anna Vangone; Anna Vangone; Mikael Trellet; Li C. Xue; Zeynep Kurkcuoglu
Published in: Proteins: Structure, Function and Genetics, 5, 2019
Publisher: Proteins: Structure, Function, and Bioinformatics
DOI: 10.1101/718122

The EOSC Early Adopter Programme - Final Report

Author(s): Diego Scardaci
Published in: 2021
Publisher: Zenodo

Recommendations for Services in a FAIR data ecosystem

Author(s): René van Horik; Mustapha Mokrane; Daniel Bangert; Emilie Hermans; Hylke Koers; Maaike de Jong
Published in: Patterns, 5, 2019
Publisher: Zenodo
DOI: 10.5281/zenodo.3585742

EOSC-hub Briefing Paper – Provision of Cross- Border Services

Author(s): Sergio Andreozzi (EGI), Magchiel Bijsterbosch (SURF), Luciano Gaido (INFN), Antti Pursula (CSC), Dale Robertson (Jisc)
Published in: 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.4835934

EOSC-hub Integration handbook for service providers

Author(s): Sipos, Gergely
Published in: 6, 2020
Publisher: EGI Foundation
DOI: 10.5281/zenodo.3826906

LightDock goes information-driven

Author(s): Roel-Touris, Jorge; Bonvin, Alexandre MJJ; Jiménez-García, Brian;
Published in: 2019
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/595983

Previsão em tempo real a pedido na costa portuguesa-O serviço opencoasts. pt e sua demonstração na circulação da Ria Formosa

Author(s): Teixeira, Joana; Fortunato, André B; Rogeiro, J; Azevedo, A; Rodrigues, M; Oliveira, A;
Published in: 2018
Publisher: APRH

Service for Digital Annotation of Scientific Data

Author(s): Kulhánek, Tomáš; Franc, Yann Le
Published in: 5, 2019
Publisher: Zenodo
DOI: 10.5281/zenodo.3369155

Evaluation of the EOSC-hub community (June 2020)

Author(s): Sipos, Gergely
Published in: 6, 2020
Publisher: EGI Foundation
DOI: 10.5281/zenodo.3979112

D2.9 - Final Data Policy recommendations

Author(s): Stein, Ilona von; Wittenberg, Marion; Dijk, Elly; Huigen, Frans; Baxter, Rob; Nordling, Josefine; Ohmann, Christian; Matei, Mihaela; Maria Panagiotopoulou; Manzi, Andrea; Wildish, Tony; Carrillo, Rob; Savini, Gianluca
Published in: 3, 2020
Publisher: DANS
DOI: 10.5281/zenodo.4305628

Towards an Open (Data) Science Analytics-Hub for Reproducible Multi-Model Climate Analysis at Scale

Author(s): Alessandro DrAnca; Cosimo Palazzo; Giovanni Aloisio; Sandro Fiore; Fabrizio Antonio; Donatello Elia; Dean N. Williams; Ian Foster
Published in: BigData, 4, 2018
Publisher: Zenodo
DOI: 10.5281/zenodo.2529789

Common Vision, Service Provision, and Role in the EOSC Governance. EOSC-hub and OpenAIRE-Advance White Paper

Author(s): Kupila-Rantala, Tiina; Horstmann, Wolfram
Published in: 2019
Publisher: Zenodo

Operation handbook for EOSC service providers

Author(s): Sipos, Gergely; Testi, Debora; Tonello, Nadia; Kelsey, David; Viljoen, Matthew; Pułapa, Agnieszka; Appleton, Owen
Published in: 4, 2020
Publisher: EOSC-hub project
DOI: 10.5281/zenodo.4068180

Evaluation of the EOSC-hub community (February 2020)

Author(s): Sipos, Gergely; Garavelli, Sara; Testi, Debora; Bayındır, Hakan
Published in: 2, 2020
Publisher: EOSC-hub project
DOI: 10.5281/zenodo.3906451

EOSC - a tool for enabling Open Science in Europe

Author(s): Appleton, Owen; Asmi, Ari; Bird, Ian; Dekker, Ron; Blomberg, Niklas; Dimper, Rudolf; Ferrari, Tiziana; Grant, Annabel; Jones, Sarah; Manola, Natalia; Petzold, Andreas; Rettberg, Najla; Robertson, Dale; Tenhunen, Ville; Testi, Debora; Sanden, Mark Van De
Published in: 39, 2020
Publisher: EOSC-hub project
DOI: 10.5281/zenodo.4044010

A protocol to automatically calculate homo-oligomeric protein structures through the integration of evolutionary constraints and ambiguous contacts derived from solid- or solution-state NMR

Author(s): Davide Sala; Antonio Rosato; Andrea Giachetti; Claudio Luchinat; Linda Cerofolini; Marco Fragai
Published in: Computational and Structural Biotechnology Journal, 5, 2019
Publisher: Computational and Structural Biotechnology Journal
DOI: 10.1101/714857

Opening up traditional cultural knowledge by means of European infrastructures: the examples of exploreAT! & EGI Engage

Author(s): Amelie Dorn, Eveline Wandl-Vogt, Davor Davidovic, Roberto Barbera
Published in: Revista de Humanidades Digitales, 3, 2019, ISSN 2531-1786
Publisher: RHD
DOI: 10.5944/rhd.vol.3.2019.23188

Moonlighting of Haemophilus influenzae heme acquisition systems contributes to the host airway-pathogen interplay in a coordinated manner

Author(s): Irene Rodríguez-Arce, Tamim Al-Jubair, Begoña Euba, Ariadna Fernández-Calvet, Celia Gil-Campillo, Sara Martí, Susanna Törnroth-Horsefield, Kristian Riesbeck, Junkal Garmendia
Published in: Virulence, 10/1, 2019, Page(s) 315-333, ISSN 2150-5594
Publisher: Landes Bioscience
DOI: 10.1080/21505594.2019.1596506

The EGI applications on Demand service

Author(s): Gergely Sipos, Giuseppe La Rocca, Diego Scardaci, Peter Solagna
Published in: Future Generation Computer Systems, 98, 2019, Page(s) 171-179, ISSN 0167-739X
Publisher: Elsevier BV
DOI: 10.1016/j.future.2019.03.009

The VLab Framework: An Orchestrator Component to Support Data to Knowledge Transition

Author(s): Mattia Santoro, Paolo Mazzetti, Stefano Nativi
Published in: Remote Sensing, 12/11, 2020, Page(s) 1795, ISSN 2072-4292
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/rs12111795

Biobanks in Horizon 2020: sustainability and attractive perspectives

Author(s): Judita Kinkorová, Ondřej Topolčan
Published in: EPMA Journal, 9/4, 2018, Page(s) 345-353, ISSN 1878-5077
Publisher: BioMed Central
DOI: 10.1007/s13167-018-0153-7

WLCG Authorisation from X.509 to Tokens

Author(s): Brian Bockelman, Andrea Ceccanti, Ian Collier, Linda Cornwall, Thomas Dack, Jaroslav Guenther, Mario Lassnig, Maarten Litmaath, Paul Millar, Mischa Sallé, Hannah Short, Jeny Teheran, Romain Wartel
Published in: EPJ Web of Conferences, 245, 2020, Page(s) 03001, ISSN 2100-014X
Publisher: EPJ Web Conf.
DOI: 10.1051/epjconf/202024503001

An overview of data‐driven HADDOCK strategies in CAPRI rounds 38‐45

Author(s): Panagiotis I. Koukos, Jorge Roel‐Touris, Francesco Ambrosetti, Cunliang Geng, Jörg Schaarschmidt, Mikael E. Trellet, Adrien S. J. Melquiond, Li C. Xue, Rodrigo V. Honorato, Irina Moreira, Zeynep Kurkcuoglu, Anna Vangone, Alexandre M. J. J. Bonvin
Published in: Proteins: Structure, Function, and Bioinformatics, 88/8, 2020, Page(s) 1029-1036, ISSN 0887-3585
Publisher: Wiley-Liss Inc
DOI: 10.1002/prot.25869

Insights into the Dynamics of the Human Zinc Transporter ZnT8 by MD Simulations

Author(s): Davide Sala, Andrea Giachetti, Antonio Rosato
Published in: Journal of Chemical Information and Modeling, 61/2, 2021, Page(s) 901-912, ISSN 1549-9596
Publisher: American Chemical Society
DOI: 10.1021/acs.jcim.0c01139

PDB‐tools web: A user‐friendly interface for the manipulation of PDB files

Author(s): Brian Jiménez‐García, João M. C. Teixeira, Mikael Trellet, João P. G. L. M. Rodrigues, Alexandre M. J. J. Bonvin
Published in: Proteins: Structure, Function, and Bioinformatics, 89/3, 2021, Page(s) 330-335, ISSN 0887-3585
Publisher: Wiley-Liss Inc
DOI: 10.1002/prot.26018

"Laniakea: an open solution to provide Galaxy ""on-demand"" instances over heterogeneous cloud infrastructures."

Author(s): Federico Zambelli; Federico Zambelli; Marica Antonacci; Marco Antonio Tangaro; Graziano Pesole; Graziano Pesole; Pietro Mandreoli; Pietro Mandreoli; Giacinto Donvito; Matteo Chiara
Published in: GigaScience, 5, 2018, ISSN 2047-217X
Publisher: GigaScience
DOI: 10.1101/472464

PRODIGY-crystal: a web-tool for classification of biological interfaces in protein complexes

Author(s): Brian Jiménez-García, Katarina Elez, Panagiotis I Koukos, Alexandre Mjj Bonvin, Anna Vangone
Published in: Bioinformatics, 35/22, 2019, Page(s) 4821-4823, ISSN 1367-4803
Publisher: Oxford University Press
DOI: 10.1093/bioinformatics/btz437

Information-Driven Modelling of Antibody-Antigen Complexes

Author(s): F. Ambrosetti, B. Jiménez-García, J. Roel-Touris, A.M.J.J. Bonvin
Published in: SSRN Electronic Journal, 2019, ISSN 1556-5068
Publisher: Elsevier
DOI: 10.2139/ssrn.3362436

West-Life: A Virtual Research Environment for structural biology

Author(s): Chris Morris, Paolo Andreetto, Lucia Banci, Alexandre M.J.J. Bonvin, Grzegorz Chojnowski, Laura del Cano, José Marıa Carazo, Pablo Conesa, Susan Daenke, George Damaskos, Andrea Giachetti, Natalie E.C. Haley, Maarten L. Hekkelman, Philipp Heuser, Robbie P. Joosten, Daniel Kouřil, Aleš Křenek, Tomáš Kulhánek, Victor S. Lamzin, Nurul Nadzirin, Anastassis Perrakis, Antonio Rosato, Fiona Sander
Published in: Journal of Structural Biology: X, 1, 2019, Page(s) 100006, ISSN 2590-1524
Publisher: Elsevier
DOI: 10.1016/j.yjsbx.2019.100006

Exploiting private and commercial clouds to generate on-demand CMS computing facilities with DODAS

Author(s): Daniele Spiga, Marica Antonacci, Tommaso Boccali, Andrea Ceccanti, Diego Ciangottini, Riccardo Di Maria, Giacinto Donvito, Cristina Duma, Luciano Gaido, Álvaro López García, Aida Palacio Hoz, Davide Salomoni, Mirco Tracolli
Published in: EPJ Web of Conferences, 214, 2019, Page(s) 07027, ISSN 2100-014X
Publisher: EDP Sciences
DOI: 10.1051/epjconf/201921407027

TOWARDS TRANSPARENT DATA ACCESS WITH CONTEXT AWARENESS

Author(s): Michal Wrzeszcz, Renata Slota, Jacek Kitowski
Published in: Computer Science, 19/2, 2018, Page(s) 201, ISSN 1508-2806
Publisher: AGH University of Science and Technology
DOI: 10.7494/csci.2018.19.2.2844

OPENCoastS: An open-access service for the automatic generation of coastal forecast systems

Author(s): A. Oliveira, A.B. Fortunato, J. Rogeiro, J. Teixeira, A. Azevedo, L. Lavaud, X. Bertin, J. Gomes, M. David, J. Pina, M. Rodrigues, P. Lopes
Published in: Environmental Modelling & Software, 124, 2020, Page(s) 104585, ISSN 1364-8152
Publisher: Elsevier BV
DOI: 10.1016/j.envsoft.2019.104585

A protocol to automatically calculate homo-oligomeric protein structures through the integration of evolutionary constraints and NMR ambiguous contacts

Author(s): Davide Sala, Linda Cerofolini, Marco Fragai, Andrea Giachetti, Claudio Luchinat, Antonio Rosato
Published in: Computational and Structural Biotechnology Journal, 18, 2020, Page(s) 114-124, ISSN 2001-0370
Publisher: Elsevier
DOI: 10.1016/j.csbj.2019.12.002

Using data cloud services to manage harmful algae blooms

Author(s): Aguilar, Fernando; Criado, Alberto; Monteoliva, Agustín
Published in: 5, 2019
Publisher: EOSC-hub

VESPA-Cloud

Author(s): Cecconi, Baptiste; Hamy, Philippe; Shih, Albert; Le Sidaner, Pierre; Grenier, Baptiste; Chris, Atherton; Erard, Stéphane; Demleitner, Markus; Molinaro, Marco; Pio Rossi, Angelo
Published in: 5, 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.4575174

Towards an Open (Data) Science Analytics-Hub for Reproducible Multi-Model Climate Analysis at Scale

Author(s): Sandro Fiore, Donatello Elia, Cosimo Palazzo, Alessandro DrAnca, Fabrizio Antonio, Dean N. Williams, Ian Foster, Giovanni Aloisio
Published in: 2018 IEEE International Conference on Big Data (Big Data), 2018, Page(s) 3226-3234, ISBN 978-1-5386-5035-6
Publisher: IEEE
DOI: 10.1109/bigdata.2018.8622205

Ophidia: a datacube oriented framework for large-scale OLAP-based scientific data analysis experiments

Author(s): Aloisio, Giovanni; Fiore, Sandro;
Published in: 2018
Publisher: EGU

Exploiting private and commercial clouds to generate on-demand CMS computing facilities with DODAS

Author(s): Spiga, Daniele; Spiga, Daniele;
Published in: 2018
Publisher: CERN

DODAS: How to effectively exploit heterogeneous clouds for scientific computations

Author(s): Spiga, Daniele; Antonacci, M; Boccali, T; Ciangottini, D; Costantini, A; Donvito, G; Duma, C; Duranti, M; Formato, V; Gaido, L;
Published in: 2018
Publisher: Proceedings of Science

Filesystem Front-end for Seamless Job Management in Sensitive Data e-Infrastructures and Cloud Federation

Author(s): Abdulrahman Azab, Hein Meling, Eivind Hovig, Antti Pursula
Published in: 2018 IEEE International Conference on Big Data (Big Data), 2018, Page(s) 5126-5131, ISBN 978-1-5386-5035-6
Publisher: IEEE
DOI: 10.1109/bigdata.2018.8622144

Rootless containers with udocker

Author(s): Gomes, Jorge; David, Mario; Martins, João; Campos, Isabel; López García, Álvaro; Orviz, Pablo; Kozlov, Valentin
Published in: 5, 2019
Publisher: EOSC-Hub

Best practices for service deployment and interoperability checks

Author(s): Pina, Joâo; Orviz, Pablo
Published in: 5, 2019
Publisher: EOSC-Hub