Project description
Delineating prostate cancer cell interaction with the immune system
Emerging evidence indicates that the immune system has the intriguing ability to both promote and suppress cancer onset and progression. Therefore, it is necessary to understand its role in each cancer type separately. The EU-funded milieuPCa project focuses on prostate cancer and aims to perform a multiparametric analysis at the single-cell level using omics technologies. Project results will unveil cancer cell interaction with the immune system and help understand biological mechanisms as well as identify new cancer biomarkers. Collectively, this information will lead to the design of immunotherapy strategies specific for prostate cancer.
Objective
The immune contexture of prostate cancer is poorly studied, despite among researchers there is a strong interest in developing immunotherapy approaches to cure the disease. It is known that the immune system can have a dual role in the tumor progression, in other words, it can either promote or suppress tumor growth and invasion. However, the immunomodulation of prostate cancer and the immunosuppressive mechanisms involved are still not entirely known. In this proposal, I suggest using and integrating Omics data from various sources to give a holistic and comprehensive overview of the immune milieu of prostate cancer at a single cell level. Human prostate cancer samples will be used to generate transcriptomics with scRNA-Seq, epigenomics with scATAC-Seq and multiplexed images with the Hyperion system. Transcriptomics and epigenomics data at the single cell level will allow the classification of the cell types at the molecular level, the delineation of related biomarkers and biological mechanisms as well as the establishment of a prostate cancer specific deconvolution approach. Spatial information will be obtained for candidate biomarkers found through scRNA-Seq and scATA-Seq, and all data will be then integrated in order to create a link between transcriptional regulation, signaling pathways and cell-cell interaction. High throughput data integration in prostate cancer will allow elucidation of the biological mechanisms involved in an unprecedented level. This study will be a powerful resource for future basic studies on prostate cancer, but also for guiding the development of novel immunotherapy approaches.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences biological sciences genetics RNA transcriptomes
- medical and health sciences clinical medicine oncology
- medical and health sciences basic medicine immunology immunotherapy
- natural sciences biological sciences genetics epigenetics
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Keywords
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
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H2020-EU.1.3. - EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions
MAIN PROGRAMME
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H2020-EU.1.3.2. - Nurturing excellence by means of cross-border and cross-sector mobility
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Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
MSCA-IF - Marie Skłodowska-Curie Individual Fellowships (IF)
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Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
(opens in new window) H2020-MSCA-IF-2020
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Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.
79106 Freiburg
Germany
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.