understandinG the Role of codon usAge biaS in viruS HOst jumP ProcessEs thRough statistical physics

Project Information

GRASSHOPPER

Grant agreement ID: 101026293

DOI

10.3030/101026293

Project closed

EC signature date 29 March 2021

Start date 1 October 2021

End date 30 September 2023

Funded under

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Total cost

€ 184 707,84

EU contribution

€ 184 707,84

Coordinated by

ECOLE NORMALE SUPERIEURE
France

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (1)

A transfer-learning approach to predict antigen immunogenicity and T-cell receptor specificity

Author(s): Barbara Bravi, Andrea Di Gioacchino, Jorge Fernandez-de-Cossio-Diaz, Aleksandra M Walczak, Thierry Mora, Simona Cocco, Rémi Monasson
Published in: eLife, 2023, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/elife.85126

Non-peer reviewed articles (2)

Repeats Mimic Pathogen-Associated Patterns Across a Vast Evolutionary Landscape

Author(s): Petr Šulc, Andrea Di Gioacchino, Alexander Solovyov, Sajid A. Marhon, Siyu Sun, Håvard T Lindholm, Raymond Chen, Amir Hosseini, Hua Jiang, Bao-Han Ly, Parinaz Mehdipour, Omar Abdel-Wahab, Nicolas Vabret, John LaCava, Daniel D. De Carvalho, Rémi Monasson, Simona Cocco, Benjamin D. Greenbaum
Published in: bioRxiv, 2023, ISSN 2692-8205
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2021.11.04.467016

Deciphering the code of viral-host adaptation through maximum entropy models

Author(s): Andrea Di Gioacchino, Benjamin D. Greenbaum, Remi Monasson, Simona Cocco
Published in: bioRxiv, 2023, ISSN 2692-8205
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2023.10.28.564530