SARS-coV2 variants Evaluation in pRegnancy and paeDIatrics cohorts

Informations projet

VERDI

N° de convention de subvention: 101045989

DOI

10.3030/101045989

Date de signature de la CE 11 Novembre 2021

Date de début 1 Novembre 2021

Date de fin 31 Octobre 2025

Financé au titre de

• Health

Coût total

€ 15 395 599,42

Contribution de l’UE

€ 15 395 599,42

Coordonné par

UNIVERSITA DEGLI STUDI DI PADOVA
Italy

CORDIS fournit des liens vers les livrables publics et les publications des projets HORIZON.

Les liens vers les livrables et les publications des projets du 7e PC, ainsi que les liens vers certains types de résultats spécifiques tels que les jeux de données et les logiciels, sont récupérés dynamiquement sur OpenAIRE .

Livrables

Websites, patent fillings, videos etc. (2)

CCB website

Public website to communicate on the activities of the CCB and to be used as a platform to house useful resources for cohort-related research projects. Will include a members section for CCB members.

Project Logo and Communication Material

Templates to be used in project communications

Documents, reports (4)

Risk Management Plan

Development of the risk management plan

Project Handbook

Reference manual with key processes for project implementation

First periodic report on the joint meeting of the leadership of the consortia from the projects VERDI, EuCARE, CoVICIS, Orchestra, and ReCODID to update and align each other's activity

This report will include the minutes of the meeting summarizing the collaborative work of the projects including the actions taken for maximising common data exploitation such as the use of data standards for ensuring interoperability during the first reporting period as well as potential plans for the future and lessons learnt so far Representation at the meeting from the European COVID Data Platform will be considered

Communication Plan

Plan outlining the project communication strategy

Other (1)

Workshop with stakeholders of digital survey platform

Heterogenous POV for requirement elicitation

Publications

Peer reviewed articles (69)

Preserving friendships in school contacts: An algorithm to construct synthetic temporal networks for epidemic modelling

Auteurs: Lucille Calmon, Elisabetta Colosi, Giulia Bassignana, Alain Barrat, Vittoria Colizza
Publié dans: PLOS Computational Biology, Numéro 20, 2024, ISSN 1553-7358
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/journal.pcbi.1012661

Serial Intervals for SARS-CoV-2 Omicron and Delta Variants, Belgium, November 19–December 31, 2021

Auteurs: Kremer C, Braeye T, Proesmans K, et al.
Publié dans: Emerging Infectious Diseases, Numéro 28(8), 2022, ISSN 1080-6059
Éditeur: Centers for Disease Control and Prevention, United States
DOI: 10.3201/eid2808.220220

Dengue virus importation risks in Africa: a modelling study

Auteurs: Jenicca Poongavanan, José Lourenço, Joseph L-H Tsui, Vittoria Colizza, Yajna Ramphal, Cheryl Baxter, Moritz U G Kraemer, Marcel Dunaiski, Tulio de Oliveira, Houriiyah Tegally
Publié dans: The Lancet Planetary Health, Numéro 8, 2024, ISSN 2542-5196
Éditeur: Elsevier BV
DOI: 10.1016/s2542-5196(24)00272-9

Epidemiologic Quantities for Monkeypox Virus Clade I from Historical Data with Implications for Current Outbreaks, Democratic Republic of the Congo

Auteurs: Marziano V, Guzzetta G, Longini I, Merler S.
Publié dans: Emerging Infectious Diseases, Numéro 30(10), 2024, ISSN 1080-6059
Éditeur: Centers for Disease Control and Prevention
DOI: 10.3201/eid3010.240665

Clinical features of COVID-19 in Italian outpatient children and adolescents during Parental, Delta, and Omicron waves: a prospective, observational, cohort study

Auteurs: Costanza Di Chiara; Riccardo Boracchini; Giulia Sturniolo; Alessia Barbieri; Paola Costenaro; Sandra Cozzani; Marica De Pieri; Cecilia Liberati; Annachiara Zin; Andrea Padoan; Francesco Bonfante; Fatima Kakkar; Anna Cantarutti; Daniele Donà; Carlo Giaquinto
Publié dans: Frontiers in Pediatrics, Numéro 11, 2023, ISSN 2296-2360
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fped.2023.1193857

Pediatric coronavirus disease 2019 in Africa

Auteurs: van der Zalm MM, Dona' D, Rabie H
Publié dans: Current Opinion in Pediatrics, Numéro 35, 2023, ISSN 1040-8703
Éditeur: Lippincott Williams & Wilkins Ltd.
DOI: 10.1097/MOP.0000000000001230

Participatory Surveillance for COVID-19 Trend Detection in Brazil: Cross-sectional Study

Auteurs: Wittwer S, Paolotti D, Lichand G, Leal Neto O
Publié dans: JMIR Public Health and Surveillance, Numéro 9, 2023, ISSN 2369-2960
Éditeur: JMIR Publications
DOI: 10.2196/44517

Outcomes of laboratory-confirmed SARS-CoV-2 infection during resurgence driven by Omicron lineages BA.4 and BA.5 compared with previous waves in the Western Cape Province, South Africa

Auteurs: Davies MA, Morden E, Rousseau P, Arendse J, Bam JL, Boloko L, Cloete K, Cohen C, Chetty N, Dane P, Heekes A, Hsiao NY, Hunter M, Hussey H, Jacobs T, Jassat W, Kariem S, Kassanjee R, Laenen I, Roux SL, Lessells R, Mahomed H, Maughan D, Meintjes G, Mendelso
Publié dans: International Journal of Infectious Diseases, Numéro 127, 2023, ISSN 1201-9712
Éditeur: International Society for Infectious Diseases
DOI: 10.1016/j.ijid.2022.11.024

Changing character and waning impact of COVID-19 at a tertiary centre in Cape Town, South Africa

Auteurs: Hermans LE, Booysen P, Boloko L, Adriaanse M, de Wet TJ, Lifson AR, Wadee N, Papavarnavas N, Marais G, Hsiao NY, Rosslee MJ, Symons G, Calligaro GL, Iranzadeh A, Wilkinson RJ, Ntusi NAB, Williamson C, Davies MA, Meintjes G, Wasserman S
Publié dans: Southern African journal of infectious diseases, Numéro 38, 2023, ISSN 2313-1810
Éditeur: Taylor & Francis
DOI: 10.4102/sajid.v38i1.550

Individual and familial factors associated with mRNA COVID-19 vaccine uptake in pregnancy: A large-scale registry-based linkage study

Auteurs: Elyass J, Desalegn A, Trinh NTH, Orangzeb S, Zidan M, Nordeng H, Lupattelli A.
Publié dans: Vaccine, 2024, ISSN 1873-2518
Éditeur: Elsevier
DOI: 10.1016/j.vaccine.2024.126171

Outcomes of laboratory-confirmed SARS-CoV-2 infection in the Omicron-driven fourth wave compared with previous waves in the Western Cape Province, South Africa

Auteurs: Davies MA, Kassanjee R, Rousseau P, et al.
Publié dans: Tropical Medicine & International Health, Numéro 27(6), 2022, ISSN 1360-2276
Éditeur: John Wiley & Sons Ltd.
DOI: 10.1111/tmi.13752

Behavioral changes associated to the COVID-19 vaccination: Evidence from a cross-national online survey

Auteurs: De Gaetano A, Bajardi P, Gozzi N, Perra N, Perrotta D, Paolotti D
Publié dans: Journal of Medical Internet Research, Numéro 25, 2023, ISSN 1438-8871
Éditeur: JMIR Publications Inc.
DOI: 10.2196/47563

Clinical characteristics of COVID-19 in children and adolescents: insights from an Italian paediatric cohort using a machine-learning approach

Auteurs: Stefania Fiandrino, Daniele Donà, Carlo Giaquinto, Piero Poletti, Michael Davis Tira, Costanza Di Chiara, Daniela Paolotti
Publié dans: BMJ Public Health, Numéro 3, 2025, ISSN 2753-4294
Éditeur: BMJ
DOI: 10.1136/BMJPH-2024-001888

The decline of the 2022 Italian mpox epidemic: Role of behavior changes and control strategies

Auteurs: Guzzetta G, Marziano V, Mammone A, Siddu A, Ferraro F, Caraglia A, Maraglino F, Rezza G, Vespignani A, Longini I, Ajelli M, Merler S.
Publié dans: Nature Communications, Numéro 15, 2024, ISSN 2041-1723
Éditeur: Nature Portfolio
DOI: 10.1038/s41467-024-46590-4

Mid- and Long-Term Atrio-Ventricular Functional Changes in Children after Recovery from COVID-19

Auteurs: Sabatino J, Di Chiara C, Di Candia A, et al.
Publié dans: Journal of Clinical Medicine, Numéro 12, 2022, ISSN 2077-0383
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/jcm12010186

Quantifying West Nile virus circulation in the avian host population in Northern Italy

Auteurs: Alex De Nardi, Giovanni Marini, Ilaria Dorigatti, Roberto Rosà, Marco Tamba, Luca Gelmini, Alice Prosperi, Francesco Menegale, Piero Poletti, Mattia Calzolari, Andrea Pugliese
Publié dans: Infectious Disease Modelling, Numéro 10, 2025, ISSN 2468-0427
Éditeur: Elsevier, KeAi
DOI: 10.1016/j.idm.2024.12.009

Evolutionary implications of SARS-CoV-2 vaccination for the future design of vaccination strategies

Auteurs: Rouzine I.M., Rozhnova G.
Publié dans: Communications Medicine, Numéro 3, 2023, ISSN 2730-664X
Éditeur: Nature Portfolio
DOI: 10.1038/s43856-023-00320-x

The impact of underreported infections on vaccine effectiveness estimates derived from retrospective cohort studies

Auteurs: Sacco C, Manica M, Marziano V, Fabiani M, Mateo-Urdiales A, Guzzetta G, Merler S, Pezzotti P.
Publié dans: International Journal of Epidemiology, Numéro 53, 2024, ISSN 1464-3685
Éditeur: Oxford University Press
DOI: 10.1093/ije/dyae077

Journal of Infectious Diseases

Auteurs: Ilse Westerhof, Reina Sikkema, Ganna Rozhnova, Janko van Beek, Marion Koopmans, Patricia Bruijning-Verhagen
Publié dans: The Journal of Infectious Diseases, 2025, ISSN 0022-1899
Éditeur: University of Chicago Press
DOI: 10.1093/infdis/jiaf172

Nature Communications

Auteurs: Leonardo Angeli, Constantino Pereira Caetano, Nicolas Franco, Pietro Coletti, Christel Faes, Geert Molenberghs, Philippe Beutels, Steven Abrams, Lander Willem, Niel Hens
Publié dans: Nature Communications, Numéro 16, 2025, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-025-57087-z

Lower respiratory tract infection admissions and deaths among children under 5 years in public sector facilities in the Western Cape Province, South Africa, before and during the COVID-19 pandemic (2019 - 2021)

Auteurs: Kehoe, K., Morden, E., Zinyakatira, N., Heekes, A., Jones, H. E., Walter, S. R., Jacobs, T., Murray, J., Buys, H., Redaniel, M. T., & Davies, M.-A.
Publié dans: South African Medical Journal, Numéro 114(3), 2024, ISSN 2078-5135
Éditeur: South African Medical Association
DOI: 10.7196/SAMJ.2024.v114i3.1560

COVID-19 vaccine uptake among children and adolescents in Norway: A comprehensive registry-based cohort study of over 800,000 individuals

Auteurs: Orangzeb S, Desalegn A, Trinh NTH, Zhao J, Nordeng H, Lupattelli A.
Publié dans: Vaccine, 2024, ISSN 0264-410X
Éditeur: Elsevier
DOI: 10.2139/ssrn.4693335

Stronger and durable SARS-CoV-2 immune response to mRNA vaccines in 5–11 years old children with prior COVID-19

Auteurs: Di Chiara C, Cantarutti A, Petrara MR, Bonfante F, Benetti E, Boracchini R, Bosa L, Carmona F, Cosma C, Cotugno N, Le Prevost M, Martini G, Meneghel A, Pagliari M, Palma P, Ruffoni E, Zin A, De Rossi A, Giaquinto C, Donà D, Padoan A.
Publié dans: Vaccine, Numéro 42, 2024, ISSN 0264-410X
Éditeur: Elsevier BV
DOI: 10.1016/j.vaccine.2023.12.006

Early Use of Sotrovimab in Children: A Case Report of an 11-Year-Old Kidney Transplant Recipient Infected with SARS-CoV-2

Auteurs: Di Chiara C, Mengato D, De Pieri M, et al.
Publié dans: Children (Basel), Numéro 93(4), 2022, ISSN 2227-9067
Éditeur: MDPI
DOI: 10.3390/children9040451

BNT162b2 Vaccine Effectiveness against Omicron in Children 5 to 11 Years of Age

Auteurs: Cohen-Stavi CJ, Magen O, Barda N, et al.
Publié dans: The New England Journal of Medicine, Numéro 387(3), 2022, ISSN 1533-4406
Éditeur: Massachusetts Medical Society
DOI: 10.1056/NEJMoa2205011

Clinical presentation and epidemiological assessment of confirmed human mpox cases in DR Congo: a surveillance-based observational study

Auteurs: Emile Malembi, Roser Escrig-Sarreta, Jackie Ntumba, Camila G Beiras, Robert Shongo, Justin Bengehya, Charles Nselaka, Elisabeth Pukuta, Daniel Mukadi-Bamuleka, Noëlla Mulopo-Mukanya, Xinying Leng, Clara Pérez-Mañá, Cristina Galván-Casas, Susana Muñoz, Steeven Bilembo-Kitwanda, Pierre Kitha, Vivi Maketa, Patrick Mitashi, Aruna Abedi, Justus Nsio, Steve Ahuka-Mundeke, Placide Mbala-Kingebeni, Jean-Jacques Muyembe, Michael Marks, Hypolite Muhindo-Mavoko, Oriol Mitjà, Thierry Kalonji, Derrick Tshisuaka, Bob Misima, Junior Mukaba, Freddy Bikioli, Aimé Umba, Phanzu M Delphin, Olivier Makuma, Bandu Bola Rodriguez, Innocent Kanda, Sylvie Linsuke, Joules Madinga, John Kalowa, Alba Català, María Jesús Torres, Astrid Carrion, Pere Capella, Lobna Chakkour, Maruan Dermoumi, Juan Garay, Narcís Roig, Anne Rimoine, Nicole Hoff, Emile Muhindo-Milonde, Noëlla Nsimire-Bahasa, Tavia Bodisa-Matamu, Zéphanie Paluku-Kalimuli, Michel Ngimba, Laetitia Nyinya wa Mupanga, Brigitte Modadra-Madakpa, Adèle Kavira-Kamaliro, Patrick Muhindo-Karungu, Jacques Daudi Cinyabuuma
Publié dans: The Lancet, 2025, ISSN 0140-6736
Éditeur: Elsevier BV
DOI: 10.1016/S0140-6736(25)00152-7

How does post COVID differ from other post-viral conditions in childhood and adolescence (0–20 years old)? A systematic review

Auteurs: Minotti C, McKenzie C, Dewandel I, Bekker C, Sturniolo G, Doni D, Giaquinto C, Van Der Zalm MM, Donà D.
Publié dans: eClinicalMedicine, Numéro 62, 2024, ISSN 2589-5370
Éditeur: Elsevier
DOI: 10.1016/j.eclinm.2024.102436

Challenges for modelling interventions for future pandemics

Auteurs: Mirjam E. Kretzschmar, Ben Ashby, Elizabeth Fearon, Christopher E. Overton, Jasmina Panovska-Griffiths, Lorenzo Pellis, Matthew Quaife, Ganna Rozhnova, Francesca Scarabel, Helena B. Stage, Ben Swallow, Robin N. Thompson, Michael J. Tildesley, Daniel Ville
Publié dans: Epidemics, Numéro 38, 2022, ISSN 1755-4365
Éditeur: Elsevier
DOI: 10.1016/j.epidem.2022.100546

Screening and vaccination against COVID-19 to minimise school closure: a modelling study

Auteurs: Colosi E, Bassignana G, Contreras DA, et al.
Publié dans: The Lancet Infectious Diseases, Numéro 22(7), 2022, ISSN 1473-3099
Éditeur: The Lancet Publishing Group
DOI: 10.1016/S1473-3099(22)00138-4

The effect of policy measures, school holidays and travel on the incidence of SARS-CoV-2 infection in children and adults in Estonia from 2021 to 2022

Auteurs: Hiie Soeorg, Taavi Päll, Aare Abroi, Radko Avi, Olga Sadikova, Mari-Anne Härma, Tuuli Reisberg, Irja Lutsar, Kristi Huik
Publié dans: PLOS One, Numéro 20, 2025, ISSN 1932-6203
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/JOURNAL.PONE.0327719

Bayesian nowcasting with Laplacian-P-splines

Auteurs: Sumalinab B, Gressani O, Hens N, Faes C.
Publié dans: Journal of Computational and Graphical Statistics, 2024, ISSN 1061-8600
Éditeur: Taylor and Francis Ltd
DOI: 10.1101/2022.08.26.22279249

SARS-CoV-2 transmission patterns in educational settings during the Alpha wave in Reggio-Emilia, Italy

Auteurs: Molina Grané C, Mancuso P, Vicentini M, Venturelli F, Djuric O, Manica M, Guzzetta G, Marziano V, Zardini A, d’Andrea V, Trentini F, Bisaccia E, Larosa E, Cilloni S, Cassinadri MT, Pezzotti P, Ajelli M, Rossi PG, Merler S, Poletti P.
Publié dans: Epidemics, Numéro 44, 2023, ISSN 1755-4365
Éditeur: Elsevier BV
DOI: 10.1016/j.epidem.2023.100712

Journal of Infection

Auteurs: Marieke L.A. de Hoog, Emma S.E.M. Hauser - van Westrhenen, Angelique M.A.M. Winkel, Menno D. de Jong, Marlies A. van Houten, Steven F.L. van Lelyveld, Dirk Eggink, Sjoerd Euser, Liesbeth Duijts, Joanne G. Wildenbeest, Rob Schuurman, Janneke H.H.M. van de Wijgert, Margareta Ieven, Katherine Loens, Alike W. van der Velden, Marc J.M. Bonten, Herman Goossens, Patricia C.J.L. Bruijning-Verhagen
Publié dans: Journal of Infection, Numéro 90, 2025, ISSN 0163-4453
Éditeur: W. B. Saunders Co., Ltd.
DOI: 10.1016/J.JINF.2025.106501

Editorial: Modelling COVID-19 in school settings to evaluate prevention and control protocols

Auteurs: Elisabetta Colosi; Giulia Bassignana; Alain Barrat; Vittoria Colizza
Publié dans: Anaesthesia Critical Care & Pain Medicine, Numéro 41, 2022, ISSN 2352-5568
Éditeur: Elsevier
DOI: 10.1016/j.accpm.2022.101047

Evaluation of waning of SARS-CoV-2 vaccine-induced immunity: A systematic review and meta-analysis

Auteurs: Menegale F, Manica M, Zardini A, Guzzetta G, Marziano V, D’Andrea V, Trentini F, Ajelli M, Poletti P, Merler S.
Publié dans: JAMA Network Open, Numéro 6, 2023, ISSN 2574-3805
Éditeur: American Medical Association
DOI: 10.1001/jamanetworkopen.2023.10650

Clinical Microbiology and Infection

Auteurs: Anna Górska, Lorenzo Maria Canziani, Eugenia Rinaldi, Zoi D. Pana, Sarah Beale, Francesca Bai, Bianca M. Boxma-de Klerk, Simeon de Bruijn, Daniele Donà, Miquel B. Ekkelenkamp, Francesca Incardona, Patrick Mallon, Giulia C. Marchetti, Milo Puhan, Agostino Riva, Victoria C. Simensen, Michel Vaillant, Marieke M. van der Zalm, Sander M.J. van Kuijk, Sophie van Wingerden, Ali Judd, Evelina Tacconelli, José L. Peñalvo
Publié dans: Clinical Microbiology and Infection, 2024, ISSN 1198-743X
Éditeur: Blackwell Publishing Inc.
DOI: 10.1016/j.cmi.2024.12.001

Controlling SARS-CoV-2 in schools using repetitive testing strategies

Auteurs: Torneri A, Willem L, Colizza V, et al.
Publié dans: eLife, Numéro 11:e75593, 2022, ISSN 2050-084X
Éditeur: eLife Sciences Publications Ltd
DOI: 10.7554/eLife.75593

COVID-19 in Infants Less than 3 Months: Severe or Not Severe Disease?

Auteurs: Dona' D, Montagnani C, Di Chiara C, et al.
Publié dans: Viruses, Numéro 14, 2022, ISSN 1999-4915
Éditeur: MDPI
DOI: 10.3390/v14102256

Journal of the Royal Society of Medicine

Auteurs: Snehal M Pinto Pereira, Fiona Newlands, Jake Anders, Amitava Banerjee, Sarah Beale, Ann Blandford, Kate Brown, Feifei Bu, Wing Lam Erica Fong, Gina Gilpin, Pia Hardelid, Jana Kovar, Jason Lim, Chloe Park, Vishnuga Raveendran, Anoop D Shah, Xin Shao, Andrew Wong, Terence Stephenson, Roz Shafran
Publié dans: Journal of the Royal Society of Medicine, Numéro 117, 2024, ISSN 0141-0768
Éditeur: Royal Society of Medicine
DOI: 10.1177/01410768241262661

Clinical spectrum of disease and outcomes in children with Omicron SARS-COV-2 infection in Cape Town, South Africa

Auteurs: Bekker C, Dewandel I, Redfern A, McKenzie C, Lishman J, Verhagen LM, Claassen M, Wilson S, Dunbar R, Bosch C, van Zyl G, Preiser W, Goussard P, Rabie H, van der Zalm MM
Publié dans: International Union Against Tuberculosis and Lung Disease, Numéro 1, 2024, ISSN 3005-7590
Éditeur: International Union Against Tuberculosis and Lung Disease (The Union)
DOI: 10.5588/ijtldopen.23.0053

COVID-19 and MIS-C treatment in children—results from an international survey

Auteurs: Daniele Donà; Chiara Minotti; Tiziana Masini; Martina Penazzato; Marieke M. Van Der Zalm; Ali Judd; Carlo Giaquinto; Marc Lallemant
Publié dans: European Journal of Pediatrics, 2023, ISSN 1432-1076
Éditeur: Springer Science+Business Media
DOI: 10.1007/s00431-023-05179-7

Reconstruction of SARS-CoV-2 outbreaks in a primary school using epidemiological and genomic data

Auteurs: Cécile Kremer; Andrea Torneri; Pieter J.K. Libin; Cécile Meex; Marie-Pierre Hayette; Sébastien Bontems; Keith Durkin; Maria Artesi; Vincent Bours; Philippe Lemey; Gilles Darcis; Niel Hens; Christelle Meuris
Publié dans: Epidemics, Numéro 44, 2023, ISSN 1755-4365
Éditeur: Elsevier
DOI: 10.1016/j.epidem.2023.100701

COVID-19 vaccine uptake and effectiveness by time since vaccination in the Western Cape province, South Africa: An observational cohort study during 2020-2022

Auteurs: Kassanjee, R., Davies, M. A., Heekes, A., Mahomed, H., Hawkridge, A. J., Wolmarans, M., ... Boulle, A.
Publié dans: Vaccines, 2024, ISSN 2076-393X
Éditeur: MDPI
DOI: 10.1101/2024.01.24.24301721

Planning and adjusting the COVID-19 booster vaccination campaign to reduce disease burden

Auteurs: Laura Di Domenico, Yair Goldberg, Vittoria Colizza
Publié dans: Infectious Disease Modelling, Numéro 10, 2025, ISSN 2468-0427
Éditeur: Elsevier BV, KeAi
DOI: 10.1016/j.idm.2024.09.002

Early Treatments of Fragile Children with COVID-19—Results of CLEVER (Children COVID Early Treatment), a Retrospective, Observational Study

Auteurs: Minotti C, Mengato D, De Pieri M, et al.
Publié dans: Viruses, Numéro 15, 2023, ISSN 1999-4915
Éditeur: MDPI
DOI: 10.3390/v15010192

PLoS ONE

Auteurs: Hiie Soeorg, Aare Abroi, Taavi Päll, Liidia Dotsenko, Erik Jaaniso, Katrin Kaarna, Andrio Lahesaare, Paul Naaber, Heiki Niglas, Ott Eric Oopkaup, Hedi Peterson, Tuuli Reisberg, Olga Sadikova, Steven Smit, Ulvi Gerst Talas, Radko Avi, Irja Lutsar, Kristi Huik
Publié dans: PLOS ONE, Numéro 19, 2024, ISSN 1932-6203
Éditeur: Public Library of Science
DOI: 10.1371/journal.pone.0316213

Resilience of mobility network to dynamic population response across COVID-19 interventions: evidences from Chile

Auteurs: Casaburi P, Dall'Amico L, Gozzi N, Kalimeri K, Sapienza A, Schifanella R, Di Matteo T, Ferres L, Mazzoli M.
Publié dans: PLOS Computational Biology, 2025, ISSN 1553-7358
Éditeur: Public Library of Science
DOI: 10.48550/arXiv.2405.19141

Attitudes towards booster, testing and isolation, and their impact on COVID-19 response in winter 2022/2023 in France, Belgium, and Italy: a cross-sectional survey and modelling study

Auteurs: de Meijere, G., Valdano, E., Castellano, C., Debin, M., Kengne-Kuetche, C., Turbelin, C., Noël, H., Weitz, J. S., Paolotti, D., Hermans, L., Hens, N., & Colizza, V.
Publié dans: The Lancet Regional Health - Europe, Numéro 28, 2023, ISSN 2666-7762
Éditeur: Elsevier
DOI: 10.1016/j.lanepe.2023.100614

Mathematical Biosciences

Auteurs: Alessandro De Gaetano, Alain Barrat, Daniela Paolotti
Publié dans: Mathematical Biosciences, Numéro 378, 2024, ISSN 0025-5564
Éditeur: Elsevier BV
DOI: 10.1016/j.mbs.2024.109337

Estimating SARS-CoV-2 transmission in educational settings: A retrospective cohort study

Auteurs: Manica M, Poletti P, Deandrea S, et al.
Publié dans: Influenza and other respiratory viruses, Numéro 17(1), 2023, ISSN 1750-2659
Éditeur: John Wiley & Sons Ltd
DOI: 10.1111/irv.13049

Epidemic graph diagrams as analytics for epidemic control in the data-rich era

Auteurs: Valdano E; Colombi D; Poletto C; Colizza, V
Publié dans: Nature Communications, Numéro 14, 2023, ISSN 2041-1723
Éditeur: Nature Portfolio
DOI: 10.1038/s41467-023-43856-1

A statistical modelling approach for determining the cause of reported respiratory syndromes from internet-based participatory surveillance when influenza virus and SARS-CoV-2 are co-circulating

Auteurs: Scott A. McDonald, Albert Jan van Hoek, Daniela Paolotti, Mariette Hooiveld, Adam Meijer, Marit de Lange, null null, Arianne van Gageldonk-Lafeber, Jacco Wallinga
Publié dans: PLOS Digital Health, Numéro 3, 2024, ISSN 2767-3170
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/journal.pdig.0000655

Overview of mucosal immunity and respiratory infections in children: a focus on Africa

Auteurs: Richard K. Mwape, Mish-Al Barday, Marieke M. van der Zalm, Lilly M. Verhagen
Publié dans: Current Opinion in Pediatrics, 2025, ISSN 1531-698X
Éditeur: Ovid Technologies (Wolters Kluwer Health)
DOI: 10.1097/MOP.0000000000001438

Age-specific transmission dynamics of SARS-CoV-2 during the first 2 years of the pandemic

Auteurs: Boldea, Otilia; Alipoor, Amir; Pei, Sen; Shaman, Jeffrey; Rozhnova, Ganna
Publié dans: PNAS Nexus, Numéro 3, 2024, ISSN 2752-6542
Éditeur: Oxford Academic
DOI: 10.48550/arxiv.2212.13470

Clinical Presentation and Outcome of Acute Respiratory Illnesses in South African Children During the COVID-19 Pandemic

Auteurs: Andrew Redfern; Marieke van der Zalm; Juanita Lishman; Pierre Goussard; Liezl Smit; Ron Dagan; Mikhail Barday; Minette Mare; Mathilda Claassen; Gert Van Zyl; Helena Rabie; Lilly M Verhagen
Publié dans: The Pediatric Infectious Disease Journal, Numéro 42(8), 2023, ISSN 0891-3668
Éditeur: Lippincott Williams & Wilkins
DOI: 10.1097/INF.0000000000003951

Epidemics

Auteurs: Stefania Fiandrino, Andrea Bizzotto, Giorgio Guzzetta, Stefano Merler, Federico Baldo, Eugenio Valdano, Alberto Mateo Urdiales, Antonino Bella, Francesco Celino, Lorenzo Zino, Alessandro Rizzo, Yuhan Li, Nicola Perra, Corrado Gioannini, Paolo Milano, Daniela Paolotti, Marco Quaggiotto, Luca Rossi, Ivan Vismara, Alessandro Vespignani, Nicolò Gozzi
Publié dans: Epidemics, Numéro 50, 2025, ISSN 1755-4365
Éditeur: Elsevier BV
DOI: 10.1016/J.EPIDEM.2025.100819

Risk of SARS-CoV-2 Reinfection in Children Within the 12 Months Following Mild COVID-19: Insights From a Survey Study

Auteurs: Di Chiara C, Boracchini R, Cantarutti A, Kakkar F, Oletto A, Padoan A, Donà D, Giaquinto C.
Publié dans: The Pediatric Infectious Disease Journal, Numéro 43, 2024, ISSN 0891-3668
Éditeur: Lippincott Williams & Wilkins
DOI: 10.1097/INF.0000000000004233

The impact of variant and vaccination on SARS-CoV-2 symptomatology; three prospective household cohorts

Auteurs: Westerhof I, de Hoog M, Ieven M et al.
Publié dans: International Journal of Infectious Diseases, Numéro 128, 2023, ISSN 1201-9712
Éditeur: Elsevier BV
DOI: 10.1016/j.ijid.2022.12.018

Assessing the clinical severity of the Omicron variant in the Western Cape Province, South Africa, using the diagnostic PCR proxy marker of RdRp target delay to distinguish between Omicron and Delta infections – a survival analysis

Auteurs: Hussey H, Davies MA, Heekes A, et al.
Publié dans: International Journal of Infectious Diseases, Numéro 118, 2022, ISSN 1201-9712
Éditeur: Elsevier BV
DOI: 10.1016/j.ijid.2022.02.051

The socioeconomic impact of the COVID-19 lockdown on families affected by childhood respiratory illnesses in Cape Town, South Africa

Auteurs: Anthony MG, Hoddinott G, Van Niekerk M, Dewandel I, McKenzie C, Bekker C, Rabie H, Redfern A, van der Zalm MM
Publié dans: PLOS Global Public Health, Numéro 4(3), 2024, ISSN 2767-3375
Éditeur: Public Library of Science, San Francisco, California
DOI: 10.1371/journal.pgph.0003020

Nonparametric serial interval estimation with uniform mixtures

Auteurs: Oswaldo Gressani, Niel Hens
Publié dans: PLOS Computational Biology, Numéro 21, 2025, ISSN 1553-7358
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/JOURNAL.PCBI.1013338

Flexible Bayesian estimation of incubation times

Auteurs: Gressani O, Torneri A, Hens N, Faes C
Publié dans: American Journal of Epidemiology, Numéro kwae192, 2024, ISSN 1476-6256
Éditeur: Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health
DOI: 10.1101/2023.08.07.23293752

Impact of contact data resolution on the evaluation of interventions in mathematical models of infectious diseases

Auteurs: Contreras Diego Andrés, Colosi Elisabetta, Bassignana Giulia, Colizza Vittoria, Barrat Alain
Publié dans: Journal of the Royal Society Interface, Numéro 19, 2022, ISSN 1742-5662
Éditeur: Royal Society
DOI: 10.1098/rsif.2022.0164

Minimising school disruption under high incidence conditions due to the Omicron variant in France, Switzerland, Italy, in January 2022

Auteurs: Elisabetta Colosi; Giulia Bassignana; Alain Barrat; Bruno Lina; Philippe Vanhems; Julia Bielicki; Vittoria Colizza
Publié dans: Eurosurveillance, Numéro 28(5), 2023, ISSN 1560-7917
Éditeur: European Centre for Disease Prevention and Control (ECDC)
DOI: 10.2807/1560-7917.ES.2023.28.5.2200192

Virology

Auteurs: Mathias Smet, Matilda Berkell, Anna Górska, Evelina Tacconelli, Samir Kumar-Singh, Surbhi Malhotra-Kumar
Publié dans: Virology, 2025, ISSN 0042-6822
Éditeur: Academic Press
DOI: 10.1016/J.VIROL.2025.110584

COVID-19 among adults living with HIV: correlates of mortality among public sector healthcare users in Western Cape, South Africa

Auteurs: Kassanjee, R., Davies, M. A., Ngwenya, O., Osei-Yeboah, R., Jacobs, T., Morden, E., Timmerman, V., Britz, S., Mendelson, M., Taljaard, J., Riou, J., Boulle, A., Tiffin, N., & Zinyakatira, N.
Publié dans: Journal of the International AIDS Society, 2023, ISSN 1758-2652
Éditeur: Wiley, International AIDS Society
DOI: 10.1101/2022.10.17.22281085

Vaccines

Auteurs: Elisa Barbieri, Nhung T. H. Trinh, Costanza Di Chiara, Giovanni Corrao, Riccardo Boracchini, Ester Rosa, Cecilia Liberati, Daniele Donà, Angela Lupattelli, Carlo Giaquinto, Anna Cantarutti
Publié dans: Vaccines, Numéro 13, 2025, ISSN 2076-393X
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/VACCINES13070698

BMC Public Health

Auteurs: Kathleen Kelley, Nicolò Gozzi, Mattia Mazzoli, Daniela Paolotti
Publié dans: BMC Public Health, Numéro 25, 2025, ISSN 1471-2458
Éditeur: BioMed Central
DOI: 10.1186/S12889-025-22496-8

Diarrhoeal admissions among children aged <5 years in public sector facilities in Western Cape Province, South Africa, before and during the COVID-19 pandemic (2019 - 2021)

Auteurs: K Kehoe, E Morden, N Zinyakatira, A Heekes, H E Jones, S R Walter, T Jacobs, J Murray, H Buys, B Eley, T Redaniel, M-A Davies
Publié dans: South African Medical Journal, Numéro 115, 2025, ISSN 2078-5135
Éditeur: South African Medical Association NPC
DOI: 10.7196/SAMJ.2025.V115I7.2726