Modelling nanoparticle transport in the extracellular matrix: improving drug delivery with ultrasounds

Project Information

ModEMUS

Grant agreement ID: 101062456

DOI

10.3030/101062456

Project closed

EC signature date 9 June 2022

Start date 1 August 2023

End date 31 August 2025

Funded under

• Marie Skłodowska-Curie Actions (MSCA)

Total cost

No data

EU contribution

€ 210 911,04

Coordinated by

NORGES TEKNISK-NATURVITENSKAPELIGE UNIVERSITET NTNU
Norway

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Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Data Management Plan (1)

Data Management Plan

The Data Management Plan describes the data management life cyclefor all data sets that will be collected, processed or generated by the action. It is adocument describing what data will be collected, processed or generated andfollowing what methodology and standards, whether and how this data will beshared and/or made open, and how it will be curated and preserved.

Documents, reports (1)

Communication, Dissemination & Outreach Plan

The plan describes the planned measures to maximize the impact ofthe project, including the dissemination and exploitation measures that are planned,and the target group(s) addressed. Regarding communication measures and publicengagement strategy, the aim is to inform and reach out to society and show theactivities performed, and the use and the benefits the project will have for citizens.

Publications

Thesis and dissertations (8)

Exploring Charge Regulation Effects on the Binding of G2 PAMAM-Peptide Conjugates to DNA Using Computer Simulations

Author(s): Tommy Duy Tran
Published in: 2025
Publisher: Norwegian University of Science and Technology

Modelling charge regulation effects in peptide-PAMAM conjugates

Author(s): Marius Aarsten
Published in: 2024
Publisher: Norwegian University of Science and Technology

The influence of mechanical stretching on the conformational and ionization properties of weak polyelectrolyte: linear poly(ethylenimine) as model case.

Author(s): Marcos Carrera Acosta
Published in: 2024
Publisher: University of Barcelona

A Monte Carlo Approach for RNA model and hybridization

Author(s): Cristina Landa Barrio
Published in: 2024
Publisher: Universidad Autonoma de Madrid

Modeling diffusion of nanoparticles through agarose hydrogels using molecular dynamics

Author(s): Charlotte Borge Hunskår
Published in: 2024
Publisher: Norwegian University of Science and Technology

Molecular Simulations of Ultrasound- Induced Nanoparticle Diffusion

Author(s): Hedda Horn Rønneberg
Published in: 2025
Publisher: Norwegian University of Science and Technology

Modeling the effect of focused ultrasound on nanoparticle transport using molecular dynamics

Author(s): Marit Svendby Otervik
Published in: 2024
Publisher: Norwegian University of Science and Technology

Framework for 3D Genomic MD Simulation

Author(s): Frefrik Framhus
Published in: 2025
Publisher: Norwegian University of Science and Technology

Peer reviewed articles (7)

When can flexible weak polyelectrolytes be treated as effective rigid objects?

Author(s): Javier Orradre; Pablo M. Blanco; Sergio Madurga; Francesc Mas; Josep Lluís Garcés
Published in: The Journal of Chemical Physics, Issue 161, 2024, ISSN 1089-7690
Publisher: AIP publishing
DOI: 10.1063/5.0233986

Journal of Chemical Theory and Computation

Author(s): David Beyer; Pablo M. Blanco; Jonas Landsgesell; Peter Košovan; Christian Holm
Published in: Journal of Chemical Theory and Computation, Issue 21 (3), 2024, ISSN 1549-9618
Publisher: American Chemical Society
DOI: 10.1021/ACS.JCTC.4C01010

pyMBE: The Python-based molecule builder for ESPResSo

Author(s): David Beyer; Paola B. Torres; Sebastian P. Pineda; Claudio F. Narambuena; Jean-Noël Grad; Peter Košovan; Pablo M. Blanco
Published in: The Journal of Chemical Physics, Issue 161, 2024, ISSN 1089-7690
Publisher: AIP Publishing
DOI: 10.1063/5.0216389

Constant-pH Simulations of a Coarse-Grained Model of Polyfunctional Weak Charged Biopolymers

Author(s): David Naranjo, Pablo M. Blanco, Josep L. Garcés, Sergio Madurga, and Francesc Mas
Published in: biophysica, 2024, ISSN 2673-4125
Publisher: MDPI
DOI: 10.3390/biophysica4010008

Charge Regulation Triggers Condensation of Short Oligopeptides to Polyelectrolytes

Author(s): Sebastian P. Pineda, Roman Staňo, Anastasiia Murmiliuk, Pablo M. Blanco, Patricia Montes, Zdeneǩ Tošner, Ondrě j Groborz, Jirí̌ Pánek, Martin Hrubý, Miroslav Š tep̌ ánek, and Peter Košovan
Published in: JACS Au, 2024, ISSN 2691-3704
Publisher: ACS
DOI: 10.1021/jacsau.3c00668

Patchy charge distribution affects the pH in protein solutions during dialysis.

Author(s): Sebastian P. Pineda; Pablo M. Blanco; Roman Staňo; Peter Košovan
Published in: Langmuir, Issue 41(8), 2024, ISSN 1520-5827
Publisher: American Chemical Society
DOI: 10.1021/ACS.LANGMUIR.4C04942

The explicit bonding reaction ensemble Monte Carlo method

Author(s): Pablo M. Blanco; Peter Košovan
Published in: The Journal of Chemical Physics, Issue 161, 2024, ISSN 1089-7690
Publisher: AIP publishing
DOI: 10.48550/ARXIV.2401.14288