Understanding the Language of Life: Identifying and Characterizing the Language Units in Protein Sequences

Project Information

LifeLU

Grant agreement ID: 101089287

DOI

10.3030/101089287

EC signature date 10 October 2023

Start date 1 November 2023

End date 31 October 2028

Funded under

• European Research Council (ERC)

Total cost

€ 1 982 800,00

EU contribution

€ 1 982 800,00

Coordinated by

BOGAZICI UNIVERSITESI
Türkiye

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Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (3)

BMC Bioinformatics

Author(s): Nuriye Özlem Özcan Şimşek; Arzucan Özgür; Fikret Gürgen
Published in: BMC Bioinformatics, 2025, ISSN 1471-2105
Publisher: Springer Nature
DOI: 10.1186/S12859-025-06133-0

STAR-GO: improving protein function prediction by learning to hierarchically integrate ontology-informed semantic embeddings

Author(s): Mehmet Efe Akça; Gökçe Uludoğan; Arzucan Özgür; İnci M Baytaş
Published in: Bioinformatics, 2026, ISSN 1367-4811
Publisher: Oxford University Press
DOI: 10.48550/ARXIV.2512.05245

Scientific Reports

Author(s): Musa Nuri İhtiyar; Arzucan Özgür
Published in: Scientific Reports, 2024, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.48550/ARXIV.2307.10634

Conference proceedings (1)

Linguistic Laws Meet Protein Sequences: A Comparative Analysis of Subword Tokenization Methods

Author(s): Suyunu, Burak; Taylan, Enes; Özgür, Arzucan
Published in: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2024
Publisher: IEEE
DOI: 10.48550/ARXIV.2411.17669