MICRObiome Biobanking (RI) Enabler

Informations projet

MICROBE

N° de convention de subvention: 101094353

DOI

10.3030/101094353

Date de signature de la CE 6 Decembre 2022

Date de début 1 Février 2023

Date de fin 31 Janvier 2027

Financé au titre de

• Research infrastructures

Coût total

€ 5 804 683,00

Contribution de l’UE

€ 5 804 682,50

Coordonné par

AIT AUSTRIAN INSTITUTE OF TECHNOLOGY GMBH
Austria

CORDIS fournit des liens vers les livrables publics et les publications des projets HORIZON.

Les liens vers les livrables et les publications des projets du 7e PC, ainsi que les liens vers certains types de résultats spécifiques tels que les jeux de données et les logiciels, sont récupérés dynamiquement sur OpenAIRE .

Livrables

Data sets, microdata, etc (1)

Microbiome sample & dataset search services

Search services for microbiome sample and dataset discovery across select core public repositories

Documents, reports (7)

Guidance document for the standardised pre-analytic workflow

Guidance document for the implementation of a standardised pre-analytic workflow in selected fields

White paper on ethical and regulatory aspects

White paper on ethical and regulatory aspects related to microbiome research with recommendations for researchers and policymakers

Guidance on microbiome sample accessioning

Guidance document on microbiome sample accessioning

C&D plan, incl. stakeholder analysis

Communication and dissemination plan, including stakeholder analysis

List of priorities for future isolation-based approaches of microbiota

Publication on the priorities for future isolation-based approaches of microbiota from different environments

Guiding principles for the use of microbiomes

List of guiding principles for the human and veterinary use of microbiomes

Inventory of standards/guidelines/best practices for microbiome sample pre-analytics

Inventory of currently available standards/guidelines/best practices for microbiome sample pre-analytics

Data Management Plan (1)

Data management plan

Publications

Other (2)

An Operational Definition of Microbial Keystone Taxa for Advancing Sustainable Microbiome Solutions

Auteurs: Pamela Espíndola-Hernández, Samiran Banerjee, Abdulkabir O. Abdulmalik, Diana Andrade-Linares, Germana Baldi, Gabriele Berg, Francis Q. Brearley, Cecilia Flocco, Luisa Galgani, Lina Gegeckienė, Silvia Gschwendtner, Tim Hensen, Tanja Kostic, Rodrigo Ledesma-Amaro, Lisa Maier, Anna Marciniak, Juliette Ohan, Jörg Overmann, Teresa Rito, Matthew Ryan, Stefanie Schulz, Selma Vieira, Michael Schloter
Publié dans: 2025, ISSN 1556-5068
Éditeur: Elsevier BV
DOI: 10.2139/SSRN.5191923

Introduction: Where did the Nagoya Protocol come from?

Publié dans: CASSYNI, 2025
Éditeur: CASSYNI Research Seminars
DOI: 10.52843/CASSYNI.91F2CX

Peer reviewed articles (5)

Policy Briefing: from access to use—untangling the international legal frameworks that govern microbial resources

Auteurs: Davide Faggionato, Melania Muñoz-García, Tanja Kostic, Mariana L Ferrari, Pascale Vonaesch, Mathilde Poyet, Perrine Portier, Matthew J Ryan, Djamila Djeddour, Cornelia Stumptner, Giovanna Cristina Varese, Aurora Zuzuarregui, Mathieu Groussin, Michael Schloter, Robert D Finn, Aylin S Haas, Ian Probert, Gerard Verkley, Jörg Overmann, Amber H Scholz
Publié dans: Sustainable Microbiology, Numéro 3, 2026, ISSN 2755-1970
Éditeur: Oxford University Press (OUP)
DOI: 10.1093/SUMBIO/QVAG005

How can biological databases support the new UN mechanism for benefit-sharing from digital sequence information?

Auteurs: Débora S. Raposo, Davide Faggionato, Barbara Ebert, Pablo Orozco, Guy Cochrane, Yiming Bao, Masanori Arita, Melania Muñoz-García, Jens Freitag, Tim Hirsch, Charles E. Cook, Rutger Vos, Lorenz Reimer, Sujeevan Ratnasingham, Mathieu Rouard, Sarah Brinkley, Matthias Lange, Uwe Scholz, Stephan Weise, Björn Usadel, Robert D. Finn, Chan-Ho Park, Aylin S. Haas, David Castle, Colman O’Cathail, Amber H. Scholz
Publié dans: Scientific Data, Numéro 13, 2026, ISSN 2052-4463
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S41597-026-07725-Y

Policy in practice: How to “do” the Nagoya Protocol: common misconceptions, challenges and best practices for access and benefit-sharing compliance

Auteurs: Davide Faggionato, Melania Muñoz-García, Tanja Kostic, Mariana L Ferrari, Pascale Vonaesch, Mathilde Poyet, Perrine Portier, Matthew J Ryan, Djamila Djeddour, Cornelia Stumptner, Giovanna Cristina Varese, Aurora Zuzuarregui, Mathieu Groussin, Michael Schloter, Robert D Finn, Aylin S Haas, Ian Probert, Gerard Verkley, Jörg Overmann, Amber H Scholz
Publié dans: Sustainable Microbiology, 2026, ISSN 2755-1970
Éditeur: Oxford University Press (OUP)
DOI: 10.1093/SUMBIO/QVAG007

A trait-based framework to identify microbial keystone taxa for microbiome engineering

Auteurs: Pamela Espíndola-Hernández, Samiran Banerjee, Abdulkabir O. Abdulmalik, Diana Andrade-Linares, Germana Baldi, Gabriele Berg, Francis Q. Brearley, Cecilia G. Flocco, Luisa Galgani, Lina Gegeckienė, Silvia Gschwendtner, Tim Hensen, Tanja Kostic, Rodrigo Ledesma-Amaro, Lisa Maier, Anna Marciniak, Juliette Ohan, Jörg Overmann, Teresa Rito, Matthew Ryan, Stefanie Schulz, Selma Vieira, Michael Schloter
Publié dans: Cell Reports Sustainability, Numéro 3, 2026, ISSN 2949-7906
Éditeur: Elsevier BV
DOI: 10.1016/J.CRSUS.2025.100615

From “synthetic” to defined microbial communities for clearer terminology

Auteurs: Hanna Koch, Thomas Clavel, Cintia Mayr, Benjamin L. Coltman, Michael Schloter, Julia A. Vorholt, Yolanda Sanz, Tomislav Cernava, Gwyn A. Beattie, Lene Lange, Stéphane Chaillou, Ákos T. Kovács, Hauke Smidt, Corné M. J. Pieterse, Tanja Kostic, Omri M. Finkel, Christopher E. Lawson, Luca Cocolin, Jesús Mercado-Blanco, Robert D. Finn, Kalliope K. Papadopoulou, Matthew Ryan, Marco Candela, Paul D. Cotter, Gabriele Berg, Orla O’Sullivan, Manuel Delgado-Baquerizo, Pankaj Trivedi, Trevor C. Charles, Brajesh K. Singh, Günter Brader, Malek Marian, Angela Sessitsch
Publié dans: Nature Communications, Numéro 17, 2026, ISSN 2041-1723
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S41467-026-74251-1