Traumatic Spinal Cord Injury: The Need to Classify Disease Severity

Project Information

SCIseg

Grant agreement ID: 101107932

DOI 10.3030/101107932

EC signature date 6 April 2023

Start date 1 May 2023

End date 30 April 2026

Funded under

• Marie Skłodowska-Curie Actions (MSCA)

Total cost No data

EU contribution € 269 047,20

Coordinated by

UNIVERZITA PALACKEHO V OLOMOUCI
Czechia

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Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Data Management Plan (1)

Data Management Plan

The Data Management Plan describes the data management life cycle for all data sets that will be collected processed or generated by the action It is a document describing what data will be collected processed or generated and following what methodology and standards whether and how this data will be shared andor made open and how it will be curated and preserved

Publications

Peer reviewed articles (8)

Automatic segmentation of spinal cord lesions in MS: A robust tool for axial T2-weighted MRI scans

Author(s): Enamundram Naga Karthik, Julian McGinnis, Ricarda Wurm, Sebastian Ruehling, Robert Graf, Jan Valosek, Pierre-Louis Benveniste, Markus Lauerer, Jason Talbott, Rohit Bakshi, Shahamat Tauhid, Timothy Shepherd, Achim Berthele, Claus Zimmer, Bernhard Hemmer, Daniel Rueckert, Benedikt Wiestler, Jan S. Kirschke, Julien Cohen-Adad, Mark Mühlau
Published in: Imaging Neuroscience, 2025, ISSN 2837-6056
Publisher: MIT Press
DOI: 10.1162/IMAG.A.45

Automatic segmentation of the spinal cord nerve rootlets

Author(s): Jan Valošek, Theo Mathieu, Raphaëlle Schlienger, Olivia S. Kowalczyk, Julien Cohen-Adad
Published in: Imaging Neuroscience, Issue 2, 2024, ISSN 2837-6056
Publisher: MIT Press
DOI: 10.1162/IMAG_A_00218

Normalizing spinal cord compression measures in degenerative cervical myelopathy

Author(s): Sandrine Bédard, Jan Valošek, Maryam Seif, Armin Curt, Simon Schading-Sassenhausen, Nikolai Pfender, Patrick Freund, Markus Hupp, Julien Cohen-Adad
Published in: The Spine Journal, 2025, ISSN 1529-9430
Publisher: Elsevier BV
DOI: 10.1016/J.SPINEE.2025.03.012

Reproducible Spinal Cord Quantitative MRI Analysis with the Spinal Cord Toolbox

Author(s): Jan Valošek, Julien Cohen-Adad
Published in: Magnetic Resonance in Medical Sciences, Issue 23, 2024, ISSN 1347-3182
Publisher: Japanese Society for Magnetic Resonance in Medicine
DOI: 10.2463/MRMS.REV.2023-0159

Body size and intracranial volume interact with the structure of the central nervous system: A multi-center in vivo neuroimaging study

Author(s): René Labounek, Monica T. Bondy, Amy L. Paulson, Sandrine Bédard, Mihael Abramovic, Eva Alonso-Ortiz, Nicole T Atcheson, Laura R. Barlow, Robert L. Barry, Markus Barth, Marco Battiston, Christian Büchel, Matthew D. Budde, Virginie Callot, Anna Combes, Benjamin De Leener, Maxime Descoteaux, Paulo Loureiro de Sousa, Marek Dostál, Julien Doyon, Adam V. Dvorak, Falk Eippert, Karla R. Epperson, Kevin S. Epperson, Patrick Freund, Jürgen Finsterbusch, Alexandru Foias, Michela Fratini, Issei Fukunaga, Claudia A. M. Gandini Wheeler-Kingshott, GianCarlo Germani, Guillaume Gilbert, Federico Giove, Francesco Grussu, Akifumi Hagiwara, Pierre-Gilles Henry, Tomáš Horák, Masaaki Hori, James M. Joers, Kouhei Kamiya, Haleh Karbasforoushan, Miloš Keřkovský, Ali Khatibi, Joo-won Kim, Nawal Kinany, Hagen Kitzler, Shannon Kolind, Yazhuo Kong, Petr Kudlička, Paul Kuntke, Nyoman D. Kurniawan, Slawomir Kusmia, Maria Marcella Laganà, Cornelia Laule, Christine S. W. Law, Tobias Leutritz, Yaou Liu, Sara Llufriu, Sean Mackey, Allan R. Martin, Eloy Martinez-Heras, Loan Mattera, Kristin P. O’Grady, Nico Papinutto, Daniel Papp, Deborah Pareto, Todd B. Parrish, Anna Pichiecchio, Ferran Prados, Àlex Rovira, Marc J. Ruitenberg, Rebecca S. Samson, Giovanni Savini, Maryam Seif, Alan C. Seifert, Alex K. Smith, Seth A. Smith, Zachary A. Smith, Elisabeth Solana, Yuichi Suzuki, George W Tackley, Alexandra Tinnermann, Jan Valošek, Dimitri Van De Ville, Marios C. Yiannakas, Kenneth A. Weber II, Nikolaus Weiskopf, Richard G. Wise, Patrik O. Wyss, Junqian Xu, Julien Cohen-Adad, Christophe Lenglet, Igor Nestrašil
Published in: Imaging Neuroscience, 2025, ISSN 2837-6056
Publisher: MIT Press
DOI: 10.1162/IMAG_A_00559

SCIseg: Automatic Segmentation of Intramedullary Lesions in Spinal Cord Injury on T2-weighted MRI Scans

Author(s): Enamundram Naga Karthik, Jan Valošek, Andrew C. Smith, Dario Pfyffer, Simon Schading-Sassenhausen, Lynn Farner, Kenneth A. Weber, Patrick Freund, Julien Cohen-Adad
Published in: Radiology: Artificial Intelligence, Issue 7, 2024, ISSN 2638-6100
Publisher: Radiological Society of North America (RSNA)
DOI: 10.1148/RYAI.240005

A database of the healthy human spinal cord morphometry in the PAM50 template space

Author(s): Jan Valošek, Sandrine Bédard, Miloš Keřkovský, Tomáš Rohan, Julien Cohen-Adad
Published in: Imaging Neuroscience, Issue 2, 2024, ISSN 2837-6056
Publisher: MIT Press
DOI: 10.1162/IMAG_A_00075

Evidence-based commentary on the diagnosis, management, and further research of degenerative cervical spinal cord compression in the absence of clinical symptoms of myelopathy

Author(s): Tomas Horak, Magda Horakova, Milos Kerkovsky, Marek Dostal, Petr Hlustik, Jan Valosek, Alena Svatkova, Petr Bednarik, Eva Vlckova, Josef Bednarik
Published in: Frontiers in Neurology, Issue 15, 2024, ISSN 1664-2295
Publisher: Frontiers Media SA
DOI: 10.3389/FNEUR.2024.1341371

Book chapters (1)

SCIsegV2: A Universal Tool for Segmentation of Intramedullary Lesions in Spinal Cord Injury

Author(s): Enamundram Naga Karthik, Jan Valošek, Lynn Farner, Dario Pfyffer, Simon Schading-Sassenhausen, Anna Lebret, Gergely David, Andrew C. Smith, Kenneth A. Weber II, Maryam Seif, Patrick Freund, Julien Cohen-Adad
Published in: Lecture Notes in Computer Science, Applications of Medical Artificial Intelligence, 2025
Publisher: Springer Nature Switzerland
DOI: 10.1007/978-3-031-82007-6_19