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TRansition to agriculture 4.0: increasing crop resiliency with Artificial Intelligence Technology

Periodic Reporting for period 2 - TRAIT4.0 (TRansition to agriculture 4.0: increasing crop resiliency with Artificial Intelligence Technology)

Période du rapport: 2024-01-01 au 2024-12-31

In response to pressing global challenges like population growth and climate change, agriculture faces the urgent task of significantly increasing crop production. Traditionally, plant breeding has played a vital role in meeting evolving food demands, but the complexity of data integration has hindered its potential. Furthermore, the agriculture sector is threatened by climate change-induced extreme weather events, jeopardizing food security.

The EU-funded TRAIT4.0 project introduces Computomics' revolutionary ⨉SeedScore® technology to address these challenges. ⨉SeedScore® utilizes bioinformatical algorithms to identify superior plants based on genotype, environment, and management factors, achieving predictions ten times more accurate than traditional methods. This empowers breeders to select climate-resilient crops, optimize crosses, and make data-driven decisions, ultimately contributing to sustainable and efficient agriculture.

The project's objectives are to tackle global food security issues, empower breeders with innovative technology, and offer a sustainable alternative to genetic modification.
'Throughout the project, significant advancements were made, furthering the development and capabilities of the xSeedScore® technology. The work performed has been instrumental in addressing key challenges in plant breeding, specifically in automating data processing, improving accuracy, and enhancing scalability for global deployment.

In WP2, which focused on creating collaboration agreements for breeders and distributors, substantial progress was made in establishing legal frameworks for data sharing, ensuring compliance with data privacy and intellectual property laws. This included successful development and negotiation of legal agreements such as NDAs and MTAs. Tailored data-sharing interfaces are now being developed to meet specific client needs. These agreements ensure secure and efficient sharing of data between Computomics and breeders, as well as distributors. Additionally, collaboration with distributors like BayWa and Beiselen helped strengthen the understanding of market requirements for the genetic-based crop placement model, positioning Computomics for future partnerships.

WP3 saw significant advancements in line breeding and hybrid breeding activities. Data collection efforts from diverse sources led to the development of comprehensive datasets for multiple European crop species, such as barley, wheat, and rice. Computational modeling using these datasets is ongoing, with notable progress in creating high-quality models for European varieties. This was complemented by successful simulations of breeding lines and hybrids, with advanced crossings generated for pilot clients. The development of automated workflows for data processing and simulations has significantly improved the efficiency of generating breeding recommendations. The creation of the Line Breeding Dashboard and Hybrid Breeding Dashboard further enhanced decision-making by providing breeders with intuitive and interactive tools to analyze large datasets and make data-driven decisions.

WP4, dedicated to scaling up and automating processes, made substantial strides in increasing cost-effectiveness through automation. This included development of a modular software tool for automated error detection and data processing to streamline data integration into xSeedScore®´and customer-specfici process routines and automated dashboards that allow breeders to directly interact with results. A scalable, efficient process was created reducing manual intervention and accelerating data analysis. In addition, field tests were evaluated with an automated interface developed for downloading genotyping and field test data, improving model creation speed. Also, API was developed to allow location-based crop placement recommentations, bridging the gap between farmers, seed companies and traders.
The TRAIT4.0 project has achieved remarkable results, demonstrating the transformative potential of the xSeedScore® technology in plant breeding and agriculture. The ability to accurately predict the performance of crop varieties, taking into account both genetic and environmental factors, positions xSeedScore® as a revolutionary tool in the industry. The integration of environmental data, such as weather patterns and soil conditions, with genomic data enables breeders to create climate-resilient crop varieties that can withstand extreme weather events, contributing to global food security.

The advances in automating data processing and error checking significantly reduce the time and effort traditionally required for data entry and analysis, improving the efficiency of breeding programs. By providing breeders with real-time insights and predictions, xSeedScore® enhances decision-making capabilities and accelerates the breeding process, allowing for faster development of new crop varieties that are better suited to changing environmental conditions.

Beyond the agricultural sector, the impact of xSeedScore® extends to sustainability. By optimizing crop varieties, xSeedScore® reduces resource wastage, including land, water, and labor, making agricultural practices more efficient and sustainable. This aligns with global efforts to address the challenges of population growth, climate change, and resource scarcity. Furthermore, xSeedScore® offers a competitive alternative to genetic modification, providing a natural breeding approach that addresses consumer concerns about GMOs while still achieving improved crop performance.

To ensure the long-term success of xSeedScore®, the next steps involve addressing key barriers to market access and commercialization. Strengthening IPR and expanding the technology’s global reach will be essential for ensuring its widespread adoption. Collaborating with regulatory authorities will help ensure compliance with agricultural standards and facilitate smoother integration into various markets. Ongoing research and development efforts will focus on refining xSeedScore® to accommodate additional crop species and further enhance its predictive capabilities. Pilot projects and validation studies will play a crucial role in demonstrating the effectiveness of the technology and building trust among potential customers and stakeholders. These efforts will enable xSeedScore® to continue making significant contributions to sustainable agriculture while positioning Computomics as a leader in the field.
New client dashboard
Distribution of phenotype values per environment.
Hybrid breeding model performance of maize yield performance in two genetically distinct groups 1+2
Line breeding model performance of wheat yield performance across all locations (Loc 1-3)