Objective
The outgoing phase: Structural proteomics is a large-scale project to determine a sufficiently large number of structures to be representative of all protein folds. This objective is approached using high-throughput protein preparation and structure determination with X-ray crystallography and nuclear magnetic resonance (NMR) spectroscopy. My particular interest involves the use of NMR spectroscopy in structural proteomics.
The development of NMR spectroscopy for structural proteomics of Thermotoga maritima is a major focus of the research group of Professor Kurt Wüthrich at The Scripps Research Institute, which forms a part of the Joint Centre for Structural Genomics.
About 60% of T. maritima proteins do not have predicted structural annotations, and their levels of homology to proteins with known structures are lower than 30%. The structurally unpredictable proteins with fewer than 150 amino acid residues will be targets for my structural studies. The structures of proteins exhibiting promising NMR spectra will be determined using NMR spectroscopy. The determined structures will provide a basis for further functional studies. The return phase: Enzymes are of great interest to chemical and pharmaceutical industry as asymmetric catalysts. Humicola lanuginosa lipase (HLL) hydrolyses water-insoluble esters, and is applied as a detergent constituent. The proposed research deals with the studies on structural basis of HLL enantioselectivity.
The enzyme will be in vitro evolved towards improved enantioselectivity by a number of cycles involving:
i) introduction of mutations, and
ii) selection of improved HLL using high-throughput screening method.
The structure of the evolved protein will be studied with NMR spectroscopy. Comparison of the obtained structure with the wild type will reveal structural basis of HLL enantioselectivity.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences biological sciences biochemistry biomolecules proteins proteomics
- natural sciences earth and related environmental sciences geology mineralogy crystallography
- natural sciences physical sciences optics spectroscopy absorption spectroscopy
- natural sciences chemical sciences catalysis
- natural sciences biological sciences biochemistry biomolecules proteins enzymes
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Keywords
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
FP6-2004-MOBILITY-6
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Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
OIF - Marie Curie actions-Outgoing International Fellowships
Coordinator
MULHEIM AN DER RUHR
Germany
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.