Objective
In this proposal we aim to address several complex biophysical problems at single molecule level that remained elusive due to the lack of appropriate experimental approach where one could manipulate independently both interacting biomolecules and in the same time measure the strength of their interaction and correlate it with their electronic signature. In particular we are interested in finding out how biopolymer finds, enters and translocates nanopore. Equally intriguing is still unresolved mechanism of phage DNA ejection. We will also investigate how exactly proteins recognize the target binding places on DNA and if the protein DNA recognition is based on the complementarity of their charge patterns.
To allow addressing those biophysical problems we will develop novel experimental framework by integrating electrodes to the nanopore based force spectroscopy. The proposed strategy will enable two directions of the research: single molecule manipulation and single molecule detection /sensing equally suitable for investigating complex biophysical problems and molecular recognition assays.
By exploiting superior sensing and detection capabilities of our devices, we will investigate following practical applications improved nucleotide detection, selective protein detection and protein charge profiling via nanopore unfolding.
Unique combination of optical manipulation and nanofluidics could lead to new methods of bioanalysis, mechanical characterization and discrimination between specific and non-specific DNA protein interactions. This research proposal combines nanofabrication, optics, nano/microfluidics, electronics, computer programming, and biochemistry
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences physical sciences classical mechanics fluid mechanics microfluidics
- natural sciences biological sciences microbiology virology
- natural sciences biological sciences genetics DNA
- natural sciences biological sciences biochemistry biomolecules proteins
- natural sciences biological sciences genetics nucleotides
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Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
ERC-2010-StG_20091028
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Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Host institution
1015 LAUSANNE
Switzerland
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.