Objective
Epigenetics is a new frontier in biology. It has yielded revolutionary insight into how the genome works, and has profound implication for human health.
This project focuses on the best-established epigenetic mark, DNA methylation. This mark is essential for the embryonic development and adult life of mammals, and acts primarily by regulating gene expression.
While the essential functions of DNA methylation are well-known, our knowledge of its effectors is very limited. Nine mammalian proteins are known to recognize methylated DNA and regulate gene expression, but each has so far been studied in isolation, and on a very small portion of the genome.
We want to describe the full landscape of DNA methylation in human cells by studying all 9 known proteins in parallel in a unified experimental system, using genome-wide approaches. Briefly, all proteins will be used in chromatin- immunoprecipitation followed by massive sequencing (ChIP-SEQ), in the human cell line K562. We will validate the identified patterns by directed approaches, submit them to an extensive bio-informatic analysis, and compare them to the distribution of DNA methylation, modified histones, transcription factors, and cofactors that have been and are being identified in this cell line. Biological hypotheses will be drawn from the results and tested experimentally in K562 and in non-transformed cells.
Our data will yield the first integrated view of DNA methylation, its targets, and its effectors, in human cells, and will provide a quantum leap over the existing state of the art. The project will advance basic research, and will also likely prove useful in medicine.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences biological sciences genetics DNA
- natural sciences biological sciences biochemistry biomolecules proteins
- natural sciences biological sciences developmental biology
- natural sciences biological sciences genetics genomes
- natural sciences biological sciences genetics epigenetics
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Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
FP7-PEOPLE-2010-RG
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Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Coordinator
75794 PARIS
France
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.