Objective
Statistical inference is of increasing importance in population genetics as large data sets permit researchers to ask more challenging questions than was feasible in the past. This has profound implications for many important fields such as the understanding of genetic diseases in humans and other species, human evolutionary history, and genetic monitoring of endangered or invasive species. Leading laboratories in this field are all in statistics departments of US and UK universities, whereas most end users of these methods are biologists by training.
The proposer is an experienced biologist with a strong background in statistics. He aims to popularise and improve currently available methods to widen their current audience. His project involves theoretical developments in Monte Carlo methodology as well as computer programming. Both aspects require some training in addition to close interaction with computational statisticians. The training objectives concern mainly the theory of Monte Carlo methods, Importance Sampling and Resembling and pseudo-likelihood based methods.
The project is aimed at widening the scope of methods of inference to a broad set of population evolutionary scenarios including divergence, admixture and variable size. Two complementary approaches will be pursued: one based of the estimation of likelihood and the other on Approximate Bayesian Computation (ABC). Likelihood based approaches will involve Importance Sampling schemes, Markov Chain Monte Carlo (including population methods) and Sampling Importance Resembling. Improvement of the efficiency of the ABC approach is expected from exploiting adaptive sampling of parameters. For both approaches, generic software will be developed to widen their appeal to a broader audience. The realization of this project will finally benefit to many population geneticists who will dispose of a versatile and simple to use software to analyse more thoroughly their molecular datasets.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences computer and information sciences software
- humanities history and archaeology history
- natural sciences biological sciences biochemistry biomolecules proteins
- natural sciences biological sciences genetics mutation
- natural sciences biological sciences ecology invasive species
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Keywords
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
FP6-2005-MOBILITY-5
See other projects for this call
Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Coordinator
LONDON
United Kingdom
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.