Objective
Plant cells are surrounded by a strong wall composed mainly of polysaccharides. This wall is essential for the form of the plant and allows the plant to stand upright, and the wall is the first line of defence against invading pathogens. Very little is known about how the wall polysaccharides are formed and integrated into the wall. Many enzymes are necessary for biosynthesis of the polysaccharides; the majority are glycosyltransferases (GTs) but also transglycosidases are involved.
The overall objective of the project is to assign function to genes involved in the biogenesis of plant cell wall polysaccharides. A functional genomics strategy will be pursued using Arabidopsis thaliana as the model:
1) Development and use of bioinformatics to predict which open reading frames are involved in cell wall biosynthesis.
2) Reverse genetics. A high throughput approach will allow investigation of at least 100 GTs. Clones will be produced in GateWay entry vectors for the easy sub-cloning in vectors for expression, epitope tagging etc. The activities of heterologously expressed enzymes will be determined using assays developed in the project.
3) Novel analytical tools for characterization of polysaccharides in the mutants will be developed and applied including antibodies and carbohydrate binding modules for in situ polysaccharide analysis, mass spectrometry, polysaccharide sequencing, substrate-chips for surface plasmon resonance, glyco-chips for activity screening etc.
4) Protein-protein interactions between the identified enzymes and other proteins will be investigated by proteomics, epitope tagging and bioimaging.
The network consists of 10 partners from 7 countries and will provide an outstanding environment for training of young researchers. In addition to the training implied in carrying out a challenging research project with frequent exchange between the partner laboratories, the network will implement a formal training program consisting of courses and workshops.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences biological sciences genetics
- natural sciences biological sciences biochemistry biomolecules proteins proteomics
- natural sciences biological sciences biochemistry biomolecules carbohydrates
- natural sciences chemical sciences analytical chemistry mass spectrometry
- natural sciences biological sciences biochemistry biomolecules proteins enzymes
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Keywords
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
FP6-2002-MOBILITY-1
See other projects for this call
Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Coordinator
KØBENHAVN K.
Denmark
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.