A Clinical Decision Support system based on Quantitative multimodal brain MRI for personalized treatment in neurological and psychiatric disorders

Deliverables

project video established; project brochure, information letters and printed communication; website updated

Project webpage and mailing list established; Exploitation Plan finalized; Project description and updated information appears on project webpage

Broad Dissemination and Communication

Organization of an international workshop on clinical decision support public demonstration of fully integrated MRI analysis and clinical decision support software 15 scientific publications in journals and 30 conference contributions 5 participations in industry fairs at large conferences 4 freeware MRI analysis modules made available to Clinical Trial Units demonstration of CDSS at two Clinical Trial companies and Clinical Trial Unit of CHAR

Publications

From micro‐ to macro‐structures in multiple sclerosis: what is the added value of diffusion imaging

Author(s): Mara Cercignani, Claudia Gandini Wheeler‐Kingshott
Published in: NMR in Biomedicine, Issue 32/4, 2018, Page(s) e3888, ISSN 0952-3480
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/nbm.3888

Depression is associated with hyperconnectivity of an introspective socio-affective network during the recall of formative relationship episodes

Author(s): L.M. Wade-Bohleber, H. Boeker, S. Grimm, M. Gärtner, J. Ernst, D.A. Recher, N. Buergi, E. Seifritz, A. Richter
Published in: Journal of Affective Disorders, Issue 274, 2020, Page(s) 522-534, ISSN 0165-0327
Publisher: Elsevier BV
DOI: 10.1016/j.jad.2020.05.110

Differential Alterations in Resting State Functional Connectivity Associated with Depressive Symptoms and Early Life Adversity

Author(s): Eleonora Fadel, Heinz Boeker, Matti Gaertner, Andre Richter, Birgit Kleim, Erich Seifritz, Simone Grimm, Laura M. Wade-Bohleber
Published in: Brain Sciences, Issue 11/5, 2021, Page(s) 591, ISSN 2076-3425
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/brainsci11050591

Prominent Changes in Cerebro-Cerebellar Functional Connectivity During Continuous Cognitive Processing

Author(s): Gloria Castellazzi, Stefania D. Bruno, Ahmed T. Toosy, Letizia Casiraghi, Fulvia Palesi, Giovanni Savini, Egidio D’Angelo, Claudia Angela Michela Gandini Wheeler-Kingshott
Published in: Frontiers in Cellular Neuroscience, Issue 12, 2018, ISSN 1662-5102
Publisher: Frontiers Research Foundation
DOI: 10.3389/fncel.2018.00331

Challenges and Perspectives of Quantitative Functional Sodium Imaging (fNaI)

Author(s): Claudia A. M. Gandini Wheeler-Kingshott, Frank Riemer, Fulvia Palesi, Antonio Ricciardi, Gloria Castellazzi, Xavier Golay, Ferran Prados, Bhavana Solanky, Egidio U. D’Angelo
Published in: Frontiers in Neuroscience, Issue 12, 2018, ISSN 1662-453X
Publisher: Frontiers Research Foundation
DOI: 10.3389/fnins.2018.00810

ProFit-1D - a 1-D fitting software and open-source validation datasets

Author(s): Tamas Borbath, Saipavitra Murali-Manohar, Johanna Dorst, Andrew Martin Wright, Anke Henning
Published in: Magnetic Resonance in Medicine, 2021, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.28941

Contribution of macromolecules to brain 1 H MR spectra: Experts' consensus recommendations

Author(s): Cristina Cudalbu, Kevin L. Behar, Pallab K. Bhattacharyya, Wolfgang Bogner, Tamas Borbath, Robin A. Graaf, Rolf Gruetter, Anke Henning, Christoph Juchem, Roland Kreis, Phil Lee, Hongxia Lei, Małgorzata Marjańska, Ralf Mekle, Saipavitra Murali‐Manohar, Michal Považan, Veronika Rackayová, Dunja Simicic, Johannes Slotboom, Brian J. Soher, Zenon Starčuk, Jana Starčuková, Ivan Tkáč, Stephen
Published in: NMR in Biomedicine, Issue 34/5, 2021, ISSN 0952-3480
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/nbm.4393

Spinal cord atrophy as a primary outcome measure in phase II trials of progressive multiple sclerosis

Author(s): Niamh Cawley, Carmen Tur, Ferran Prados, Domenico Plantone, Hugh Kearney, Khaled Abdel-Aziz, Sebastian Ourselin, Claudia AM Gandini Wheeler-Kingshott, David H Miller, Alan J Thompson, Olga Ciccarelli
Published in: Multiple Sclerosis Journal, Issue 24/7, 2018, Page(s) 932-941, ISSN 1352-4585
Publisher: SAGE Publications
DOI: 10.1177/1352458517709954

Unsuspected Involvement of Spinal Cord in Alzheimer Disease

Author(s): Roberta Maria Lorenzi, Fulvia Palesi, Gloria Castellazzi, Paolo Vitali, Nicoletta Anzalone, Sara Bernini, Matteo Cotta Ramusino, Elena Sinforiani, Giuseppe Micieli, Alfredo Costa, Egidio D’Angelo, Claudia A. M. Gandini Wheeler-Kingshott
Published in: Frontiers in Cellular Neuroscience, Issue 14, 2020, ISSN 1662-5102
Publisher: Frontiers Research Foundation
DOI: 10.3389/fncel.2020.00006

Lifespan normative data on rates of brain volume changes

Author(s): Marco Battaglini, Giordano Gentile, Ludovico Luchetti, Antonio Giorgio, Hugo Vrenken, Frederik Barkhof, Keith S. Cover, Rohit Bakshi, Renxin Chu, Maria Pia Sormani, Christian Enzinger, Stefan Ropele, Olga Ciccarelli, Claudia Wheeler-Kingshott, Marios Yiannakas, Massimo Filippi, Maria Assunta Rocca, Paolo Preziosa, Antonio Gallo, Alvino Bisecco, Jacqueline Palace, Yazhuo Kong, Dana Horakova, Manuel
Published in: Neurobiology of Aging, Issue 81, 2019, Page(s) 30-37, ISSN 0197-4580
Publisher: Elsevier BV
DOI: 10.1016/j.neurobiolaging.2019.05.010

Guidelines for the conduct of clinical trials in spinal cord injury: Neuroimaging biomarkers

Author(s): Maryam Seif, Claudia AM Gandini Wheeler-Kingshott, Julien Cohen-Adad, Adam E Flanders, Patrick Freund
Published in: Spinal Cord, Issue 57/9, 2019, Page(s) 717-728, ISSN 1362-4393
Publisher: Nature Publishing Group
DOI: 10.1038/s41393-019-0309-x

Comparison of Neurite Orientation Dispersion and Density Imaging and Two-Compartment Spherical Mean Technique Parameter Maps in Multiple Sclerosis

Author(s): Daniel Johnson, Antonio Ricciardi, Wallace Brownlee, Baris Kanber, Ferran Prados, Sara Collorone, Enrico Kaden, Ahmed Toosy, Daniel C. Alexander, Claudia A. M. Gandini Wheeler-Kingshott, Olga Ciccarelli, Francesco Grussu
Published in: Frontiers in Neurology, Issue 12, 2021, ISSN 1664-2295
Publisher: Frontiers Research Foundation
DOI: 10.3389/fneur.2021.662855

Uncertainty modelling in deep learning for safer neuroimage enhancement: Demonstration in diffusion MRI

Author(s): Ryutaro Tanno, Daniel E. Worrall, Enrico Kaden, Aurobrata Ghosh, Francesco Grussu, Alberto Bizzi, Stamatios N. Sotiropoulos, Antonio Criminisi, Daniel C. Alexander
Published in: NeuroImage, Issue 225, 2021, Page(s) 117366, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2020.117366

Progression of regional grey matter atrophy in multiple sclerosis

Author(s): Arman Eshaghi, Razvan V Marinescu, Alexandra L Young, Nicholas C Firth, Ferran Prados, M Jorge Cardoso, Carmen Tur, Floriana De Angelis, Niamh Cawley, Wallace J Brownlee, Nicola De Stefano, M Laura Stromillo, Marco Battaglini, Serena Ruggieri, Claudio Gasperini, Massimo Filippi, Maria A Rocca, Alex Rovira, Jaume Sastre-Garriga, Jeroen J G Geurts, Hugo Vrenken, Viktor Wottschel, Cyra E Leurs, Berna
Published in: Brain, Issue 141/6, 2018, Page(s) 1665-1677, ISSN 0006-8950
Publisher: Oxford University Press
DOI: 10.1093/brain/awy088

Motor and higher‐order functions topography of the human dentate nuclei identified with tractography and clustering methods

Author(s): Fulvia Palesi, Matteo Ferrante, Marta Gaviraghi, Anastasia Misiti, Giovanni Savini, Alessandro Lascialfari, Egidio D'Angelo, Claudia A. M. Gandini Wheeler‐Kingshott
Published in: Human Brain Mapping, 2021, ISSN 1065-9471
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/hbm.25551

Thalamocortical Connectivity in Experimentally-Induced Migraine Attacks: A Pilot Study

Author(s): Daniele Martinelli, Gloria Castellazzi, Roberto De Icco, Ana Bacila, Marta Allena, Arianna Faggioli, Grazia Sances, Anna Pichiecchio, David Borsook, Claudia A. M. Gandini Wheeler-Kingshott, Cristina Tassorelli
Published in: Brain Sciences, Issue 11/2, 2021, Page(s) 165, ISSN 2076-3425
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/brainsci11020165

Aberrant working memory processing in major depression: evidence from multivoxel pattern classification

Author(s): Matti Gärtner, M. Elisabetta Ghisu, Milan Scheidegger, Luisa Bönke, Yan Fan, Anna Stippl, Ana-Lucia Herrera-Melendez, Sophie Metz, Emilia Winnebeck, Maria Fissler, Anke Henning, Malek Bajbouj, Karsten Borgwardt, Thorsten Barnhofer, Simone Grimm
Published in: Neuropsychopharmacology, Issue 43/9, 2018, Page(s) 1972-1979, ISSN 0893-133X
Publisher: Nature Publishing Group
DOI: 10.1038/s41386-018-0081-1

A framework for motion correction of background suppressed arterial spin labeling perfusion images acquired with simultaneous multi-slice EPI

Author(s): Yuriko Suzuki, Thomas W. Okell, Michael A. Chappell, Matthias J.P. van Osch
Published in: Magnetic Resonance in Medicine, 2018, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.27499

Optimization of the spatial modulation function of vessel-encoded pseudo-continuous arterial spin labeling and its application to dynamic angiography

Author(s): Yuriko Suzuki, Matthias J. P. van Osch, Noriyuki Fujima, Thomas W. Okell
Published in: Magnetic Resonance in Medicine, 2018, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.27418

Advances in arterial spin labelling MRI methods for measuring perfusion and collateral flow

Author(s): Matthias JP van Osch, Wouter M Teeuwisse, Zhensen Chen, Yuriko Suzuki, Michael Helle, Sophie Schmid
Published in: Journal of Cerebral Blood Flow & Metabolism, Issue 38/9, 2017, Page(s) 1461-1480, ISSN 0271-678X
Publisher: Lippincott Williams & Wilkins Ltd.
DOI: 10.1177/0271678X17713434

Simultaneous acquisition of perfusion image and dynamic MR angiography using time-encoded pseudo-continuous ASL

Author(s): Yuriko Suzuki, Michael Helle, Peter Koken, Marc Van Cauteren, Matthias J. P. van Osch
Published in: Magnetic Resonance in Medicine, Issue 79/5, 2018, Page(s) 2676-2684, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.26926

Deep gray matter volume loss drives disability worsening in multiple sclerosis

Author(s): Arman Eshaghi, Ferran Prados, Wallace J. Brownlee, Daniel R. Altmann, Carmen Tur, M. Jorge Cardoso, Floriana De Angelis, Steven H. van de Pavert, Niamh Cawley, Nicola De Stefano, M. Laura Stromillo, Marco Battaglini, Serena Ruggieri, Claudio Gasperini, Massimo Filippi, Maria A. Rocca, Alex Rovira, Jaume Sastre-Garriga, Hugo Vrenken, Cyra E. Leurs, Joep Killestein, Lukas Pirpamer, Christian Enzinge
Published in: Annals of Neurology, Issue 83/2, 2018, Page(s) 210-222, ISSN 0364-5134
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/ana.25145

graphkernels: R and Python packages for graph comparison

Author(s): Mahito Sugiyama, M Elisabetta Ghisu, Felipe Llinares-López, Karsten Borgwardt
Published in: Bioinformatics, Issue 34/3, 2017, Page(s) 530-532, ISSN 1367-4803
Publisher: Oxford University Press
DOI: 10.1093/bioinformatics/btx602

Neurite dispersion: a new marker of multiple sclerosis spinal cord pathology?

Author(s): Francesco Grussu, Torben Schneider, Carmen Tur, Richard L. Yates, Mohamed Tachrount, Andrada Ianuş, Marios C. Yiannakas, Jia Newcombe, Hui Zhang, Daniel C. Alexander, Gabriele C. DeLuca, Claudia A. M. Gandini Wheeler-Kingshott
Published in: Annals of Clinical and Translational Neurology, Issue 4/9, 2017, Page(s) 663-679, ISSN 2328-9503
Publisher: Wiley
DOI: 10.1002/acn3.445

LISA improves statistical analysis for fMRI

Author(s): Gabriele Lohmann, Johannes Stelzer, Eric Lacosse, Vinod J. Kumar, Karsten Mueller, Esther Kuehn, Wolfgang Grodd, Klaus Scheffler
Published in: Nature Communications, Issue 9/1, 2018, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-018-06304-z

Compressed sensing for high-resolution nonlipid suppressed 1 H FID MRSI of the human brain at 9.4T

Author(s): Sahar Nassirpour, Paul Chang, Nikolai Avdievitch, Anke Henning
Published in: Magnetic Resonance in Medicine, Issue 80/6, 2018, Page(s) 2311-2325, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.27225

Over-discretized SENSE reconstruction and B 0 correction for accelerated non-lipid-suppressed 1 H FID MRSI of the human brain at 9.4 T

Author(s): Sahar Nassirpour, Paul Chang, Thomas Kirchner, Anke Henning
Published in: NMR in Biomedicine, 2018, Page(s) e4014, ISSN 0952-3480
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/nbm.4014

In vivo estimation of transverse relaxation time constant (T 2 ) of 17 human brain metabolites at 3T

Author(s): Patrik O. Wyss, Claudio Bianchini, Milan Scheidegger, Ioannis A. Giapitzakis, Andreas Hock, Alexander Fuchs, Anke Henning
Published in: Magnetic Resonance in Medicine, Issue 80/2, 2018, Page(s) 452-461, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.27067

Characterization of macromolecular baseline of human brain using metabolite cycled semi-LASER at 9.4T

Author(s): Ioannis-Angelos Giapitzakis, Nikolai Avdievich, Anke Henning
Published in: Magnetic Resonance in Medicine, Issue 80/2, 2018, Page(s) 462-473, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.27070

Investigation of the influence of macromolecules and spline baseline in the fitting model of human brain spectra at 9.4T

Author(s): Ioannis-Angelos Giapitzakis, Tamas Borbath, Saipavitra Murali-Manohar, Nikolai Avdievich, Anke Henning
Published in: Magnetic Resonance in Medicine, 2018, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.27467

MultiNet PyGRAPPA: Multiple neural networks for reconstructing variable density GRAPPA (a 1H FID MRSI study)

Author(s): Sahar Nassirpour, Paul Chang, Anke Henning
Published in: NeuroImage, Issue 183, 2018, Page(s) 336-345, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2018.08.032

Author(s): Gabriele Lohmann, Johannes Stelzer, Verena Zuber, Tilo Buschmann, Daniel Margulies, Andreas Bartels, Klaus Scheffler
Published in: PLOS ONE, Issue 11/6, 2016, Page(s) e0158185, ISSN 1932-6203
Publisher: Public Library of Science
DOI: 10.1371/journal.pone.0158185

Acceleration of ASL-based time-resolved MR angiography by acquisition of control and labeled images in the same shot (ACTRESS)

Author(s): Yuriko Suzuki, Noriyuki Fujima, Tetsuo Ogino, James Alastair Meakin, Akira Suwa, Hiroyuki Sugimori, Marc Van Cauteren, Matthias J. P. van Osch
Published in: Magnetic Resonance in Medicine, 2017, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.26667

Measuring the labeling efficiency of pseudocontinuous arterial spin labeling

Author(s): Zhensen Chen, Xingxing Zhang, Chun Yuan, Xihai Zhao, Matthias J.P. van Osch
Published in: Magnetic Resonance in Medicine, Issue 77/5, 2017, Page(s) 1841-1852, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.26266

Multi-compartment microscopic diffusion imaging

Author(s): Enrico Kaden, Nathaniel D. Kelm, Robert P. Carson, Mark D. Does, Daniel C. Alexander
Published in: NeuroImage, Issue 139, 2016, Page(s) 346-359, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2016.06.002

Quantitative mapping of the per-axon diffusion coefficients in brain white matter

Author(s): Enrico Kaden, Frithjof Kruggel, Daniel C. Alexander
Published in: Magnetic Resonance in Medicine, Issue 75/4, 2016, Page(s) 1752-1763, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.25734

Brainglance: Visualizing Group Level MRI Data at One Glance

Author(s): Johannes Stelzer, Eric Lacosse, Jonas Bause, Klaus Scheffler, Gabriele Lohmann
Published in: Frontiers in Neuroscience, Issue 13, 2019, ISSN 1662-453X
Publisher: Frontiers
DOI: 10.3389/fnins.2019.00972

Multi-parametric quantitative in vivo spinal cord MRI with unified signal readout and image denoising

Author(s): Francesco Grussu, Marco Battiston, Jelle Veraart, Torben Schneider, Julien Cohen-Adad, Timothy M. Shepherd, Daniel C. Alexander, Els Fieremans, Dmitry S. Novikov, Claudia A.M. Gandini Wheeler-Kingshott
Published in: NeuroImage, Issue 217, 2020, Page(s) 116884, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2020.116884

Functional connectivity between prefrontal cortex and subgenual cingulate predicts antidepressant effects of ketamine

Author(s): Matti Gärtner, Sabine Aust, Malek Bajbouj, Yan Fan, Katja Wingenfeld, Christian Otte, Isabella Heuser-Collier, Heinz Böker, Josef Hättenschwiler, Erich Seifritz, Simone Grimm, Milan Scheidegger
Published in: European Neuropsychopharmacology, Issue 29/4, 2019, Page(s) 501-508, ISSN 0924-977X
Publisher: Elsevier BV
DOI: 10.1016/j.euroneuro.2019.02.008

Microscopic susceptibility anisotropy imaging

Author(s): Enrico Kaden, Noemi G. Gyori, S. Umesh Rudrapatna, Irina Y. Barskaya, Iulius Dragonu, Mark D. Does, Derek K. Jones, Chris A. Clark, Daniel C. Alexander
Published in: Magnetic Resonance in Medicine, 2020, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.28303

T 2 relaxation times of macromolecules and metabolites in the human brain at 9.4 T

Author(s): Saipavitra Murali‐Manohar, Tamas Borbath, Andrew Martin Wright, Brian Soher, Ralf Mekle, Anke Henning
Published in: Magnetic Resonance in Medicine, Issue 84/2, 2020, Page(s) 542-558, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.28174

Accelerated MR spectroscopic imaging—a review of current and emerging techniques

Author(s): Wolfgang Bogner, Ricardo Otazo, Anke Henning
Published in: NMR in Biomedicine, 2020, ISSN 0952-3480
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/nbm.4314

Advanced magnetic resonance spectroscopic neuroimaging: Experts' consensus recommendations

Author(s): Andrew A. Maudsley, Ovidiu C. Andronesi, Peter B. Barker, Alberto Bizzi, Wolfgang Bogner, Anke Henning, Sarah J. Nelson, Stefan Posse, Dikoma C. Shungu, Brian J. Soher
Published in: NMR in Biomedicine, 2020, ISSN 0952-3480
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/nbm.4309

Fast and reproducible in vivo T 1 mapping of the human cervical spinal cord

Author(s): Marco Battiston, Torben Schneider, Ferran Prados, Francesco Grussu, Marios C. Yiannakas, Sebastien Ourselin, Claudia A. M. Gandini Wheeler-Kingshott, Rebecca S. Samson
Published in: Magnetic Resonance in Medicine, Issue 79/4, 2018, Page(s) 2142-2148, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.26852

An optimized framework for quantitative magnetization transfer imaging of the cervical spinal cord in vivo

Author(s): Marco Battiston, Francesco Grussu, Andrada Ianus, Torben Schneider, Ferran Prados, James Fairney, Sebastien Ourselin, Daniel C. Alexander, Mara Cercignani, Claudia A.M. Gandini Wheeler-Kingshott, Rebecca S. Samson
Published in: Magnetic Resonance in Medicine, Issue 79/5, 2018, Page(s) 2576-2588, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.26909

Relevance of time‐dependence for clinically viable diffusion imaging of the spinal cord

Author(s): Francesco Grussu, Andrada Ianuş, Carmen Tur, Ferran Prados, Torben Schneider, Enrico Kaden, Sébastien Ourselin, Ivana Drobnjak, Hui Zhang, Daniel C. Alexander, Claudia A. M. Gandini Wheeler‐Kingshott
Published in: Magnetic Resonance in Medicine, Issue 81/2, 2018, Page(s) 1247-1264, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.27463

Reduced neurite density in the brain and cervical spinal cord in relapsing–remitting multiple sclerosis: A NODDI study

Author(s): Collorone, Sara; Cawley, Niamh; Grussu, Francesco; Prados, Ferran; Tona, Francesca; Calvi, Alberto; Kanber, Baris; Schneider, Torben; Kipp, Lucas; Zhang, Hui; Alexander, Daniel C; Thompson, Alan J; Toosy, Ahmed; Wheeler-Kingshott, Claudia AM Gandini; Ciccarelli, Olga
Published in: Multiple Sclerosis Journal, Issue 19, 2019, Page(s) 135245851984510, ISSN 1352-4585
Publisher: SAGE Publications
DOI: 10.1177/1352458519885107

A multi-shell multi-tissue diffusion study of brain connectivity in early multiple sclerosis

Author(s): Carmen Tur, Francesco Grussu, Ferran Prados, Thalis Charalambous, Sara Collorone, Baris Kanber, Niamh Cawley, Daniel R Altmann, Sébastien Ourselin, Frederik Barkhof, Jonathan D Clayden, Ahmed T Toosy, Claudia AM Gandini Wheeler-Kingshott, Olga Ciccarelli
Published in: Multiple Sclerosis Journal, 2019, Page(s) 135245851984510, ISSN 1352-4585
Publisher: SAGE Publications
DOI: 10.1177/1352458519845105

Fast bound pool fraction mapping via steady‐state magnetization transfer saturation using single‐shot EPI

Author(s): Marco Battiston, Torben Schneider, Francesco Grussu, Marios C. Yiannakas, Ferran Prados, Floriana De Angelis, Claudia A. M. Gandini Wheeler‐Kingshott, Rebecca S. Samson
Published in: Magnetic Resonance in Medicine, 2019, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.27792

Generalised boundary shift integral for longitudinal assessment of spinal cord atrophy

Author(s): Prados, Ferran; Moccia, Marcello; Johnson, Aubrey; Yiannakas, Marios; Grussu, Francesco; Cardoso, Manuel Jorge; Ciccarelli, Olga; Ourselin, Sebastien; Barkhof, Frederik; Wheeler-Kingshott, Claudia
Published in: NeuroImage, Issue 209, 2020, Page(s) 116489, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2019.116489

Cross-scanner and cross-protocol diffusion MRI data harmonisation: A benchmark database and evaluation of algorithms

Author(s): Tax, Chantal M. W.; Grussu, Francesco; Kaden, Enrico; Ning, Lipeng; Rudrapatna, Umesh; Evans, C. John; St-Jean, Samuel; Leemans, Alexander; Koppers, Simon; Merhof, Dorit; Ghosh, Aurobrata; Tanno, Ryutaro; Alexander, Daniel C.; Zappala, Stefano; Charron, Cyril; Kusmia, Slawomir; Linden, David E. J.; Jones, Derek K.; Veraart, Jelle
Published in: NeuroImage, Issue 195, 2019, Page(s) 285, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2019.01.077

Probing axons using multi‐compartmental diffusion in multiple sclerosis

Author(s): Francesca Bagnato, Giulia Franco, Hua Li, Enrico Kaden, Fei Ye, Run Fan, Amalie Chen, Daniel C. Alexander, Seth A. Smith, Richard Dortch, Junzhong Xu
Published in: Annals of Clinical and Translational Neurology, Issue 6/9, 2019, Page(s) 1595-1605, ISSN 2328-9503
Publisher: Wiley
DOI: 10.1002/acn3.50836

White matter microstructural abnormalities in children with severe congenital hypothyroidism

Author(s): Hannah E. Cooper, Enrico Kaden, Lorna F. Halliday, Doris-Eva Bamiou, Kshitij Mankad, Catherine Peters, Christopher A. Clark
Published in: NeuroImage: Clinical, Issue 24, 2019, Page(s) 101980, ISSN 2213-1582
Publisher: Elsevier BV
DOI: 10.1016/j.nicl.2019.101980

Structural cortical network reorganization associated with early conversion to multiple sclerosis

Author(s): C. Tur, A. Eshaghi, D. R. Altmann, T. M. Jenkins, F. Prados, F. Grussu, T. Charalambous, A. Schmidt, S. Ourselin, J. D. Clayden, C. A. M. G. Wheeler-Kingshott, A. J. Thompson, O. Ciccarelli, A. T. Toosy
Published in: Scientific Reports, Issue 8/1, 2018, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-018-29017-1

Spinal cord grey matter segmentation challenge

Author(s): Ferran Prados, John Ashburner, Claudia Blaiotta, Tom Brosch, Julio Carballido-Gamio, Manuel Jorge Cardoso, Benjamin N. Conrad, Esha Datta, Gergely Dávid, Benjamin De Leener, Sara M. Dupont, Patrick Freund, Claudia A.M. Gandini Wheeler-Kingshott, Francesco Grussu, Roland Henry, Bennett A. Landman, Emil Ljungberg, Bailey Lyttle, Sebastien Ourselin, Nico Papinutto, Salvatore Saporito, Regina Schlaeg
Published in: NeuroImage, Issue 152, 2017, Page(s) 312-329, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2017.03.010

A framework for optimal whole-sample histological quantification of neurite orientation dispersion in the human spinal cord

Author(s): Francesco Grussu, Torben Schneider, Richard L. Yates, Hui Zhang, Claudia A.M. Gandini Wheeler-Kingshott, Gabriele C. DeLuca, Daniel C. Alexander
Published in: Journal of Neuroscience Methods, Issue 273, 2016, Page(s) 20-32, ISSN 0165-0270
Publisher: Elsevier BV
DOI: 10.1016/j.jneumeth.2016.08.002

Gray matter volume of rostral anterior cingulate cortex predicts rapid antidepressant response to ketamine

Author(s): Ana Herrera-Melendez, Anna Stippl, Sabine Aust, Milan Scheidegger, Erich Seifritz, Isabella Heuser-Collier, Christian Otte, Malek Bajbouj, Simone Grimm, Matti Gärtner
Published in: European Neuropsychopharmacology, Issue 43, 2021, Page(s) 63-70, ISSN 0924-977X
Publisher: Elsevier BV
DOI: 10.1016/j.euroneuro.2020.11.017

Ketamine specifically reduces cognitive symptoms in depressed patients: An investigation of associated neural activation patterns

Author(s): A. Stippl, M. Scheidegger, S. Aust, A. Herrera, M. Bajbouj, M. Gärtner, S. Grimm
Published in: Journal of Psychiatric Research, Issue 136, 2021, Page(s) 402-408, ISSN 0022-3956
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.jpsychires.2021.02.028

Frontal and Cerebellar Atrophy Supports FTSD-ALS Clinical Continuum

Author(s): Beatrice Pizzarotti, Fulvia Palesi, Paolo Vitali, Gloria Castellazzi, Nicoletta Anzalone, Elena Alvisi, Daniele Martinelli, Sara Bernini, Matteo Cotta Ramusino, Mauro Ceroni, Giuseppe Micieli, Elena Sinforiani, Egidio D’Angelo, Alfredo Costa, Claudia A. M. Gandini Wheeler-Kingshott
Published in: Frontiers in Aging Neuroscience, Issue 12, 2020, ISSN 1663-4365
Publisher: Frontiers Research Foundation
DOI: 10.3389/fnagi.2020.593526

Thinking about the past to shape the present: neural activation during the recall of relationship episodes

Author(s): L.M. Wade-Bohleber, H. Boeker, J. Ernst, S. Grimm, N. Brügger, I.M. Berwian, J. Vetter, K.H. Preller, H. Himmighoffen, B. Kleim, E. Seifritz, A. Richter
Published in: Behavioural Brain Research, Issue 359, 2019, Page(s) 783-791, ISSN 0166-4328
Publisher: Elsevier BV
DOI: 10.1016/j.bbr.2018.08.001

Blood Oxygenation Level-Dependent Response to Multiple Grip Forces in Multiple Sclerosis: Going Beyond the Main Effect of Movement in Brodmann Area 4a and 4p

Author(s): Adnan A. S. Alahmadi, Matteo Pardini, Rebecca S. Samson, Egidio D’Angelo, Karl J. Friston, Ahmed T. Toosy, Claudia A. M. Gandini Wheeler-Kingshott
Published in: Frontiers in Cellular Neuroscience, Issue 15, 2021, ISSN 1662-5102
Publisher: Frontiers Research Foundation
DOI: 10.3389/fncel.2021.616028

Gray vs. White Matter Segmentation of the Conus Medullaris: Reliability and Variability in Healthy Volunteers

Author(s): Marios C. Yiannakas, Martina D. Liechti, Nuttakarn Budtarad, Patrick Cullinane, Xixi Yang, Ahmed T. Toosy, Jalesh N. Panicker, Claudia A. M. Gandini Wheeler‐Kingshott
Published in: Journal of Neuroimaging, Issue 29/3, 2018, Page(s) 410-417, ISSN 1051-2284
Publisher: Sage Science Press
DOI: 10.1111/jon.12591

A novel method to measure T 1 ‐relaxation times of macromolecules and quantification of the macromolecular resonances

Author(s): Saipavitra Murali‐Manohar, Andrew Martin Wright, Tamas Borbath, Nikolai I. Avdievich, Anke Henning
Published in: Magnetic Resonance in Medicine, Issue 85/2, 2021, Page(s) 601-614, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.28484

In vivo characterization of downfield peaks at 9.4 T: T 2 relaxation times, quantification, pH estimation, and assignments

Author(s): Tamas Borbath, Saipavitra Murali‐Manohar, Andrew Martin Wright, Anke Henning
Published in: Magnetic Resonance in Medicine, Issue 85/2, 2021, Page(s) 587-600, ISSN 0740-3194
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/mrm.28442

Default Mode Network Structural Integrity and Cerebellar Connectivity Predict Information Processing Speed Deficit in Multiple Sclerosis

Author(s): Giovanni Savini, Matteo Pardini, Gloria Castellazzi, Alessandro Lascialfari, Declan Chard, Egidio D’Angelo, Claudia A. M. Gandini Wheeler-Kingshott
Published in: Frontiers in Cellular Neuroscience, Issue 13, 2019, ISSN 1662-5102
Publisher: Frontiers Research Foundation
DOI: 10.3389/fncel.2019.00021

Using routine MRI data of depressed patients to predict individual responses to electroconvulsive therapy

Author(s): Matti Gärtner, Elisabetta Ghisu, Ana Lucia Herrera-Melendez, Michael Koslowski, Sabine Aust, Patrick Asbach, Christian Otte, Francesca Regen, Isabella Heuser, Karsten Borgwardt, Simone Grimm, Malek Bajbouj
Published in: Experimental Neurology, Issue 335, 2021, Page(s) 113505, ISSN 0014-4886
Publisher: Academic Press
DOI: 10.1016/j.expneurol.2020.113505

I See Your Effort: Force-Related BOLD Effects in an Extended Action Execution–Observation Network Involving the Cerebellum

Author(s): Letizia Casiraghi, Adnan A S Alahmadi, Anita Monteverdi, Fulvia Palesi, Gloria Castellazzi, Giovanni Savini, Karl Friston, Claudia A M Gandini Wheeler-Kingshott, Egidio D’Angelo
Published in: Cerebral Cortex, Issue 29/3, 2019, Page(s) 1351-1368, ISSN 1047-3211
Publisher: Oxford University Press
DOI: 10.1093/cercor/bhy322

Assessing proximal and distal peripheral nerve damage in relapsing-remitting multiple sclerosis using magnetisation transfer ratio.

Author(s): Yiannakas M, Boonsuth R, Tur C, Battiston M, Grussu F, Samson R, Schneider T, Yoneyama M, Prados F, Collorone S, Cortese R, Ciccarelli O, Gandini Wheeler-Kingshott C.
Published in: Book of Abstracts, 29th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Vancouver, Canada, 2021, Page(s) 2803
Publisher: ISMRM

Spinal cord and brain DTI alterations in cervical spondylotic myelopathy (CSM).

Author(s): Samson RS, Stutters J, Ali Akbar M, Curt A, Cohen-Adad J, Fehlings M, Freund P, Innerarity B, Seif M, Tur C, Gandini Wheeler-Kingshott CAM.
Published in: Book of Abstracts, 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Sydney, Australia, 2020
Publisher: ISMRM

Origin of the time dependence of the diffusion-weighted signal in spinal cord white matter.

Author(s): Grussu F, Ianus A, Tur Gomez C, Prados Carrasco F, Schneider T, Ourselin S, Drobnjak I, Zhang, Alexander D, Wheeler-Kingshott CAM. (2017, April 24).
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine 2017, p843. Honolulu, USA, 2017, Page(s) 843
Publisher: ISMRM

Quantitative multi-modal MRI shows correlations between lesion iron deposition and neuro-axonal density in progressive multiple sclerosis.

Author(s): Collorone S, Battiston M, Prados F, Calvi A, Kanber B, Grussu F, Yiannakas M, Tur C, Samson R, Ciccarelli O, Gandini Wheeler-Kingshott C.
Published in: Book of Abstracts, 29th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Vancouver, Canada, 2021, Page(s) 2822
Publisher: ISMRM

Structural network indicating overactive bladder in multiple sclerosis.

Author(s): Yang X, Castellazzi G, Liechti M, Charalambous T, Kanber B, Yiannakas M, Gonzales G, Wheeler-Kingshott C.
Published in: Book of Abstracts, 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Sydney, Australia, 2020
Publisher: ISMRM

Automatic segmentation of dentate nuclei for microstructure assessment: application to temporal lobe epilepsy patients.

Author(s): Gaviraghi M, Savini G, Castellazzi G, Rolandi N, Sacco S, D’Angelo E, Palesi F, Vitali P, Gandini Wheeler-Kingshott CAM.
Published in: Book of Abstracts, 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Sydney, Australia, 2020
Publisher: ISMRM

Reconstruction of quantitative proton density maps from routine clinical data. poster.

Author(s): Antonio Ricciardi , Francesco Grussu , Rebecca Samson , Daniel C Alexander , and Claudia Angela Gandini Wheeler-Kingshott.
Published in: Proc. Intl. Soc. Mag. Reson. Med.., 2018, Page(s) 2846
Publisher: ISMRM

Biophysically meaningful MRI features for accurate classification of multiple sclerosis phenotypes. poster.

Author(s): Antonio Ricciardi, Francesco Grussu, Wallace Brownlee, Baris Kanber, Ferran Prados, Sara Collorone, Enrico Kaden, Ahmed Toosy, Sebastien Ourselin, Olga Ciccarelli, Daniel C Alexander, and Claudia Angela Gandini Wheeler-Kingshott.
Published in: Proc. Intl. Soc. Mag. Reson. Med., 2018, Page(s) 1981
Publisher: ISMRM

A unified signal readout for reproducible multimodal characterisation of brain microstructure.

Author(s): Grussu F, Battiston M, Prados Carrasco F, Schneider T, Kaden E, Ourselin S, Samson R, Alexander D, Wheeler-Kingshott CAM. (2017, April 24).
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine, 2017, Page(s) 3399
Publisher: ISMRM

Quantification of Human Brain Metabolites using Two-Dimensional J-Resolved Metabolite-Cycled semiLASER at 9.4 T.

Author(s): Murali-Manohar S, Borbath T, Wright A, Henning A.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine, 2021
Publisher: International Society of Magnetic Resonance in Medicine

Evaluation of quantitative MRI parameters reproducibility across a major scanner upgrade: spinal cord diffusion weighted (DW) imaging.

Author(s): Boonsuth R, Battiston M, Grussu F, Yiannakas M, Schneider T, Samson R, Prados F, Wheeler-Kingshott C.
Published in: Book of Abstracts, 29th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Vancouver, Canada, 2021, Page(s) 2455
Publisher: ISMRM

A Wasserstein Subsequence Kernel for Time Series

Author(s): Christian Bock, Matteo Togninalli, Elisabetta Ghisu, Thomas Gumbsch, Bastian Rieck, Karsten Borgwardt
Published in: 2019 IEEE International Conference on Data Mining (ICDM), 2019, Page(s) 964-969, ISBN 978-1-7281-4604-1
Publisher: IEEE
DOI: 10.1109/icdm.2019.00108

A unified signal readout improves denoising of multi-modal spinal cord MRI. poster,

Author(s): Francesco Grussu, Marco Battiston, Jelle Veraart, Torben Schneider, Julien Cohen-Adad, Manuel Jorge Cardoso, Daniel C. Alexander, Dmitry S. Novikov, Els Fieremans* and Claudia Angela Gandini Wheeler-Kingshott* * joint senior authors.
Published in: Proc. Intl. Soc. Mag. Reson. Med.., 2018, Page(s) 2752
Publisher: ISMRM

Fast Bound Pool Fraction mapping via steady-state MT saturation using single-shot EPI.

Author(s): Battiston M, Schneider T, Grussu F, Yiannakas M, Prados F, Gandini Wheeler-Kingshott CAM, Samson RS.
Published in: Book of Abstracts, 2019
Publisher: ISMRM

ProFit-v3: accuracy and precision evaluation of a new spectral fitting software.

Author(s): Borbath T, Murali-Manohar S, Dorst J, Wright A, Henning A.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine, 2021
Publisher: International Society of Magnetic Resonance in Medicine

Reliability of Single- and Multi-TI ASL measurements with a clinical product sequence.

Author(s): Antonio Ricciardi, Marco Castellaro, Alberto Miglioranza, Giancarlo Germani, Paolo Vitali, Giuseppe Micieli, Egidio D'Angelo, Fulvia Palesi, Gloria Castellazzi, Claudia AM Gandini Wheeler-Kingshott, Enrico De Vita, and Alessandra Bertoldo.
Published in: Book of Abstracts, 25th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Honolulu, USA, 2017, Page(s) 1877
Publisher: ISMRM

Advanced magnetic resonance imaging to study brain tissue alterations in people infected with SARS-COV-2.

Author(s): Gandini Wheeler-Kingshott C, Yiannakas M, Makaronidis J, Prados F, Kanber B, Solanky B, Battiston M, Wingrove J, Grussu F, Castellazzi G, Stutters J, McStravick J, Karsa A, Samson R, Shmueli K, Golay X, Parker G, Alexander D, Hacohen Y, D'Angelo E, Barkhof F, Tur C, Grandjean L, Ciccarelli O, Batterham R.
Published in: Book of Abstracts, 29th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Vancouver, Canada, 2021, Page(s) 1742
Publisher: ISMRM

The impact of cerebrocortical-cerebellar loops on brain dynamics in simulations using The Virtual Brain.

Author(s): Palesi F, Lorenzi R, Casellato C, Ritter P, Jirsa V, Gandini Wheeler-Kingshott CAM, D'Angelo E.
Published in: Book of Abstracts, 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Sydney, Australia, 2020
Publisher: ISMRM

Microstructure changes in secondary progressive multiple sclerosis measured using advanced quantitative MRI of the brain and spine.

Author(s): Battiston M, Tur C, Yiannakas MC, Grussu F, Schneider T, Martinelli D, Kanber B, Prados F, Pajak P, Ciccarelli O, Samson R, Gandini Wheeler-Kingshott CAM.
Published in: Book of Abstracts, 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Sydney, Australia, 2020
Publisher: ISMRM

Improved Spatial encoding of vessel-selective pCASL: improving efficiency, minimising mislabelling, and shortening scan-time for artery specific MRA.

Author(s): Suzuki, Y., van Osch, M. J.P. and Okell, TW.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2017, 2017, Page(s) 3617
Publisher: ISMRM

Qualitative Comparison between In Vivo J-Resolved Semi-LASER at 3 T and 9.4 T.

Author(s): Venkateshwaran Murali Manohar Saipavitra, Giapitzakis Ioannis Angelos, Borbáth Tamás, Gärtner Matti, Henning Anke
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2017, 2017, Page(s) 3015
Publisher: ISMRM

Fitting comparison for 9.4T 1D semi-LASER and 2D-J-resolved semi-LASER data.

Author(s): Borbáth Tamás, Giapitzakis Ioannis Angelos, Venkateshwaran Murali Manohar Saipavitra, Henning Anke
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2017, 2017, Page(s) 2995
Publisher: ISMRM

Silving the dark-side of multiband-ASL: A framework to correct for increased motion artefacts in MB-ASL due to sharp transitions in the level of background suppression.

Author(s): Suzuki, Y., Okell, TW., Teeuwisse, WM., Schmid, S., van der Plas, M., Chappell, MA., and van Osch, M. J.P.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2017, 2017, Page(s) 3616
Publisher: ISMRM

Reproducibility of SMT-Based Microscopic Diffusion Anisotropy Imaging on a Clinical MRI System

Author(s): Foley Cara, Kaden Enrico, Seunarine Kiran, Hall Matt, Carmichael David, Clayden Jonathan, Clark Chris
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2017, 2017, Page(s) 3471
Publisher: ISMRM

Origin of the Time Dependence of the Diffusion-Weighted Signal in Spinal Cord White Matter.

Author(s): Grussu Francesco, Ianus Andrada, Tur Carmen, Prados Ferran, Schneider Torben, Ourselin Sébastien, Drobnjak Ivana, Zhang Hui, Alexander Daniel, Gandini Wheeler-Kingshott Claudia
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2017, 2017, Page(s) 0843
Publisher: ISMRM

A Unified Signal Readout for Reproducible Multimodal Characterisation of Brain Microstructure

Author(s): Grussu Francesco, Battiston Marco, Prados Ferran, Schneider Torben, Kaden Enrico, Ourselin Sébastien, Samson Rebecca, Alexander Daniel, Gandini Wheeler-Kingshott Claudia
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2017, 2017, Page(s) 3399
Publisher: ISMRM

Towards a Fitting Model of Macromolecular Spectra: Amino Acids.

Author(s): Tamas Borbath, Saipavitra Murali Manohar, Anke Henning.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2019, 2019, Page(s) 27/1068
Publisher: International Society for Magnetic Resonance in Medicine (ISMRM)

Longitudinal Relaxation Times of Metabolites in vivo at 9.4 T.

Author(s): Andrew Wright, Saipavitra Murali-Manohar, Tamas Borbath.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2019, 2019, Page(s) 27/514
Publisher: International Society for Magnetic Resonance in Medicine (ISMRM).

T2 Relaxation Times of Macromolecules in Human Brain Spectra at 9.4 T.

Author(s): Tamas Borbath, Saipavitra Murali Manohar, Andrew Wright, Anke Henning.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2019, 2019
Publisher: International Society for Magnetic Resonance in Medicine (ISMRM).

Characterization of Downfield Resonances and their T2 Relaxation times in Human Brain at 9.4 T.

Author(s): Saipavitra Murali-Manohar, Tamas Borbath, Andrew Wright, Anke Henning.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2019, 2019
Publisher: International Society for Magnetic Resonance in Medicine (ISMRM).

Longitudinal Relaxation times of Macromolecular Resonances at 9.4 T in Human Brain.

Author(s): Saipavitra Murali-Manohar, Andrew Wright, Tamas Borbath, Anke Henning.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2019, 2019
Publisher: International Society for Magnetic Resonance in Medicine (ISMRM).

Relaxation corrected and Sequence-dependent Macromolecule Baseline Model.

Author(s): Andrew Wright, Saipavitra Murali Manohar, Anke Henning.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2019, 2019
Publisher: International Society for Magnetic Resonance in Medicine (ISMRM).

Myelin-sensitive indices in multiple sclerosis: the unseen qualities of qualitative clinical MRI.

Author(s): Antonio Ricciardi, Francesco Grussu, Marco Battiston, Ferran Prados, Baris Kanber, Rebecca S Samson, Daniel C Alexander, Declan T Chard, Claudia A M Gandini Wheeler-Kingshott.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2019, 2019
Publisher: International Society for Magnetic Resonance in Medicine (ISMRM).

In-vivo neural soma imaging using b-tensor encoding and deep learning.

Author(s): Noemi G. Gyori, Christopher A. Clark, Iulius Dragonu, Daniel C. Alexander, Enrico Kaden.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM)., Issue 2019, 2019
Publisher: International Society for Magnetic Resonance in Medicine (ISMRM).

Bipartite connectivity mapping (BCM).

Author(s): Gabriele Lohmann, Johannes Stelzer, Klaus Scheffler.
Published in: Biennial Conference on Resting-State and Brain Connectivity., Issue 2018, 2018
Publisher: Montreal Neurological Institute and Hospital, McGill University

T1 Relaxation Times of Macromolecular Resonances for Grey and White Matter Voxels in Human Brain at 9.4 T.

Author(s): Saipavitra Murali Manohar, Andrew Wright, Anke Henning.
Published in: Annual Scientific Meeting of the ESMRMB, Issue 2019, 2019
Publisher: ESMRMB

Estimation of T2 Relaxation Times and Absolute Quantification of Metabolites in the Human Brain at 9.4 T.

Author(s): Saipavitra Murali-Manohar, Tamas Borbath, Anke Henning.
Published in: Annual Scientific Meeting of the ESMRMB, Issue 2019, 2019
Publisher: ESMRMB

A simplified approach to quantification of multiple contrasts from time-encoded ASL.

Author(s): Lena Vaclavu , C Falcon, J Domingo, P. Montesinos Suárez de la Vega, Matthias van Osch.
Published in: Annual Scientific Meeting of the ESMRMB, Issue 2019, 2019
Publisher: ESMRMB

Post-Acquisition Correction of Macromolecules using a Relaxation- and Sequence-dependent Simulation Model.

Author(s): Andrew Wright, Saipavitra Murali Manohar, Anke Henning.
Published in: Annual Scientific Meeting of the ESMRMB, Issue 2019, 2019
Publisher: ESMRMB

Quantitative Metabolite Mapping of the Human Brain at 9.4 T.

Author(s): Wright A, Murali Manohar S, Henning, A.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine, 2020
Publisher: International Society of Magnetic Resonance in Medicine

Relaxation corrected simulated MM model for improved fitting and quantification of 1H FID MRSI data.

Author(s): Wright A, Murali Manohar S, Ziegs T, Henning, A.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine, 2021
Publisher: International Society of Magnetic Resonance in Medicine

Magnitude versus complex-valued images for spinal cord diffusion MRI: which one is best? Oral presentation.

Author(s): Francesco Grussu , Jelle Veraart , Marco Battiston, Torben Schneider, Julien Cohen-Adad, Manuel Jorge Cardoso, Claudia Angela Gandini Wheeler-Kingshott, Els Fieremans , Daniel C. Alexander, and Dmitry S. Novikov.
Published in: Proc. Intl. Soc. Mag. Reson. Med.., 2018, Page(s) 0466
Publisher: ISMRM

Evaluation of quantitative MRI parameters reproducibility across a major scanner upgrade: the example of T1.

Author(s): Boonsuth R, Battiston M, Grussu F, Yiannakas MC, Schneider T, Samson RS, Prados F, Gandini Wheeler-Kingshott CAM.
Published in: Book of Abstracts, 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Sydney, Australia, 2020
Publisher: ISMRM

Clinically viable g-ratio imaging with unified readout at 3T: evaluation and comparison. Presentation.

Author(s): Grussu F, Battiston M, Prados Carrasco FERRAN, Schneider TORBEN, Kaden ENRICO, Samson REBECCA, Alexander DANIELC, Wheeler-Kingshott CLAUDIA.
Published in: Proceedings of the International Society for Magnetic Resonance in Medicine, 2019, Page(s) 2973
Publisher: ISMRM

Myelin-sensitive indices in multiple sclerosis: the unseen qualities of qualitative clinical MRI.

Author(s): Ricciardi A, Grussu F, Battiston M, Prados Carrasco F, Kanber B, Samson R, Alexander D, Chard D, Wheeler-Kingshott C.
Published in: Presentation. ISMRM, Montreal, Canada, 2019
Publisher: ISMRM

QuaSI-MTR (qualitative scans for imaging MTR): deep-learned MTR from routine scans using U-nets.

Author(s): Ricciardi A, Grussu F, Prados F, Kanber B, Samson RS, Alexander DC, Chard DT, Gandini Wheeler-Kingshott CAM.
Published in: Book of Abstracts, 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Sydney, Australia, 2020
Publisher: ISMRM

Wasserstein Weisfeiler-Lehman Graph Kernels

Author(s): Matteo Togninalli, Elisabetta Ghisu, Felipe Llinares-Lopez, Bastian Rieck, and Karsten Borgwardt
Published in: Advances in Neural Information Processing Systems 32 (NeurIPS 2019), Issue 9, 2019, Page(s) 6407-6417
Publisher: Curran

Inflated False Negative Rates Undermine Reproducibility In Task-Based fMRI

Author(s): Gabriele Lohmann, Johannes Stelzer, Karsten Mueller, Eric Lacosse, Tilo Buschmann, Vinod J. Kumar, Wolfgang Grodd, Klaus Scheffler
Published in: BioRxiv, 2017, ISSN 1097-0193
Publisher: Cold Spring Harbour Laboratory
DOI: 10.1101/122788

Eigenvector centrality mapping for ultrahigh resolution fMRI data.

Author(s): Gabriele Lohmann, Alexander Loktyushin, Johannes Stelzer, Klaus Scheffler.
Published in: BioRxiv, 2019, ISSN 1097-0193
Publisher: Cold Spring Harbour Laboratory
DOI: 10.1101/494732

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