GAMES researchers investigated the impact of gut microbes on CNS autoimmunity by combining germ-free (GF) mouse models, knock-out mouse strains, antibiotic treatments, and dietary manipulation strategies to learn the mechanisms by which gut microbes impact CNS autoimmunity. They specifically worked towards defining the importance of microbial flora in the causal role of CNS autoimmunity. They showed that gut microbiota from human MS patients triggers disease in experimental animals suggesting a potential causal role of human gut microbiota in disease pathogenesis. In a follow-up of this work, they also found differential immune responses induced by specific species of microbiota from human MS patients compared to controls. Further, they used dietary interventions to modulate microbiota in models of CNS autoimmunity. They showed that mice fed a fiber-rich diet or a high salt diet were resistant to developing spontaneous CNS autoimmunity. The disease resistance was a result of changes in the gut microbiota and metabolites. They showed that metabolites, in particular, long-chain fatty acids were responsible for the decrease of pro-inflammatory responses and increase of anti-inflammatory immune responses. In the context of a high salt diet, they showed that microbial metabolites reinforced the integrity of the blood-brain barrier thereby controlling CNS autoimmunity. In both cases of dietary interventions, the disease protective effect was observed only if the treatment started before the disease onset but not during later progressive stages of the disease.