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Training and research in Listeria monocytogenes Adaptation through Proteomic and Transcriptome deep Sequencing Analysis

Deliverables

Workshop 3

Workshop on future carrier. With partner organisation: LSG

Effect food characteristics upon virulence

Understanding how food constituents affect virulence will inform industry on risk

Transcriptome/Subproteo me database

Compiles all proteomic data

Network-wide event year 2

NUIGINRAsummerschoolworkshop

Effect food constituents upon gene expression

Global approach linking food to risk

Database structured

Tool that will organise all global data

Network-wide events year 1

summershoolworkshopoutreach course

Conference

ESRs public engagement

Mid term review meeting

Mid term review meeting compulsroy for all ETN projects

Publications

Desiccation: An environmental and food industry stress that bacteria commonly face

Author(s): Julia Esbelin, Tiago Santos, Michel Hébraud
Published in: Food Microbiology, Issue 69, 2018, Page(s) 82-88, ISSN 0740-0020
Publisher: Academic Press
DOI: 10.1016/j.fm.2017.07.017

Increased Adhesion of Listeria monocytogenes Strains to Abiotic Surfaces under Cold Stress

Author(s): Bo-Hyung Lee, Michel Hébraud, Thierry Bernardi
Published in: Frontiers in Microbiology, Issue 8, 2017, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2017.02221

Listeria monocytogenes Relies on the Heme-Regulated Transporter hrtAB to Resist Heme Toxicity and Uses Heme as a Signal to Induce Transcription of lmo1634, Encoding Listeria Adhesion Protein

Author(s): Patrícia Teixeira dos Santos, Pernille Tholund Larsen, Pilar Menendez-Gil, Eva Maria Sternkopf Lillebæk, Birgitte Haahr Kallipolitis
Published in: Frontiers in Microbiology, Issue 9, 2018, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2018.03090

Microbial stress meeting: From systems to molecules and back

Author(s): Amber L. Dorey, Fabio Giovannercole, Duarte Guerreiro, Catarina Marinho
Published in: New Biotechnology, Issue 49, 2019, Page(s) 66-70, ISSN 1871-6784
Publisher: Elsevier BV
DOI: 10.1016/j.nbt.2018.09.002

Comparison of three methods for cell surface proteome extraction of Listeria monocytogenes biofilms

Author(s): Julia Esbelin, Tiago Santos, Céline Ribière, Mickaël Desvaux, Didier Viala, Christophe Chambon, Michel Hébraud
Published in: OMICS: A Journal of Integrative Biology, Issue 22/12, 2018, Page(s) 779-787, ISSN 1557-8100
Publisher: Mary Ann Liebert, Inc.
DOI: 10.1089/omi.2018.0144

MALDI mass spectrometry imaging and in situ microproteomics of Listeria monocytogenes biofilms

Author(s): Tiago Santos, Laëtitia Théron, Christophe Chambon, Didier Viala, Delphine Centeno, Julia Esbelin, Michel Hébraud
Published in: Journal of Proteomics, Issue 187, 2018, Page(s) 152-160, ISSN 1874-3919
Publisher: Elsevier BV
DOI: 10.1016/j.jprot.2018.07.012

Small RNAs in major foodborne pathogens: from novel regulatory activities to future applications

Author(s): Mette Thorsing, Patrícia Teixeira dos Santos, Birgitte Haahr Kallipolitis
Published in: Current Opinion in Biotechnology, Issue 49, 2018, Page(s) 120-128, ISSN 0958-1669
Publisher: Elsevier BV
DOI: 10.1016/j.copbio.2017.08.006

Glycerol metabolism induces Listeria monocytogenes biofilm formation at the air-liquid interface

Author(s): Natalia Crespo Tapia, Heidy M.W. den Besten, Tjakko Abee
Published in: International Journal of Food Microbiology, Issue 273, 2018, Page(s) 20-27, ISSN 0168-1605
Publisher: Elsevier BV
DOI: 10.1016/j.ijfoodmicro.2018.03.009

Short-term consumption of a high-fat diet increases host susceptibility to Listeria monocytogenes infection

Author(s): Vanessa Las Heras, Adam G. Clooney, Feargal J. Ryan, Raul Cabrera-Rubio, Pat G. Casey, Cara M. Hueston, Jorge Pinheiro, Justine K. Rudkin, Silvia Melgar, Paul D. Cotter, Colin Hill, Cormac G. M. Gahan
Published in: Microbiome, Issue 7/1, 2019, ISSN 2049-2618
Publisher: BioMed Central
DOI: 10.1186/s40168-019-0621-x

The Small Regulatory RNAs LhrC1–5 Contribute to the Response of Listeria monocytogenes to Heme Toxicity

Author(s): Patrícia T. dos Santos, Pilar Menendez-Gil, Dharmesh Sabharwal, Jens-Henrik Christensen, Maja Z. Brunhede, Eva M. S. Lillebæk, Birgitte H. Kallipolitis
Published in: Frontiers in Microbiology, Issue 9, 2018, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2018.00599

Role and regulation of the stress activated sigma factor sigma B (σB) in the saprophytic and host-associated life stages of Listeria monocytogenes

Author(s): Amber Dorey, Catarina Marinho, Pascal Piveteau, Conor O'Byrne
Published in: Advances in Applied Microbiology, 2018
Publisher: Elsevier
DOI: 10.1016/bs.aambs.2018.11.001

Adaptation of Listeria monocytogenes to transmission between environments

Author(s): Patricia Teixeira Dos Santos
Published in: 2018
Publisher: University of Southern Denmark

Investigation of rhizosphere as a niche for Listeria monocytogenes

Author(s): Gal L, Boussemart G, Ortiz Camargo A, Garmy D, Piveteau P
Published in: 2016
Publisher: N/A

Impact of dietary fat content on host susceptibility to Listeria monocytogenes infection. Poster

Author(s): V. Las Heras, K. Govindarajan, S. Joyce, P. Casey, R. Rubio, P. Cotter, C. Hill, C. Gahan
Published in: 2017
Publisher: N/A

The expression of the chitinolytic system of Listeria monocytogenes is subject to different regulation depending on carbon source utilisation including cellobiose and glucose.

Author(s): M. Villoria Recio, M. Halberg Larsen, H. Ingmer
Published in: 2017
Publisher: N/A

A high fat diet influences host susceptibility to Listeria monocytogenes infection in a murine disease model. Oral presentation.

Author(s): V. Las Heras, R. Rubio, P. Cotter, C. Hill, G. Gahan
Published in: 2018
Publisher: N/A

Chitin attenuates virulence expression in Listeria monocytogenes. Poster.

Author(s): M. Villoria Recio, H. Ingmer, M. Halberg Larsen
Published in: 2018
Publisher: N/A

The impact of temperature on the response of L. monocytogenes to visible light. Poster

Author(s): A Dorey, B. O’Donoghue, C. Bennett, A. Conneely, C. O’Byrne
Published in: 2018
Publisher: N/A

Listeria monocytogenes planktonic and sessile cells adaptation to temperatures seen through shotgun proteomics. Poster.

Author(s): T. Santos, C. Chambon, D. Viala, J. Estebin, M. Hébraud
Published in: 2018
Publisher: N/A

Glycerol metabolism induces Listeria monocytogenes biofilm formation at the air-liquid interface. Poster

Author(s): N. Crespo Tapia, H MW. Den Besten, T. Abee
Published in: 2018
Publisher: N/A

The small regulatory RNAs LhrC1-5 contribute to the response of Listeria monocytogenes to heme stress. Oral presentation.

Author(s): P Dos Santos, D. Sabharwal, J-H Christensen, M Z Brunhede, E M Sternkopf Lillebaek, B.H. Kallipolitis
Published in: 2018
Publisher: N/A

Unravelling the regulatory role of the oB-dependent non-coding RNA Rli47 in Listeria monocytogenes . Oral presentation.

Author(s): C. Marinho, P. Dos Santos, B. Kallipolitis, D. Garmyn, L. Gal, C. O’Byrne, P. Piveteau, C. O’Byrne
Published in: 2018
Publisher: N/A

Statistical modeling of bacterial promoter sequences for regulatory motif discovery with the help of transcription profiles. Poster

Author(s): I. Sultan, S. Schbath, P. Nicolas
Published in: 2018
Publisher: N/A

Association between Listeria monocytogenes genotypes and biofilm formations under food processing environments. Poster

Author(s): B. Lee, S. Cole, T. Bernardi, S. Badel, L. Guillier, P. Piveteau
Published in: 2018
Publisher: N/A

LasA high fat diet influences host susceptibility to Listeria monocytogenes infection in a murine disease model. Poster.

Author(s): V. Las Heras, R. Rubio, P. Cotter, C. Hill, G. Gahan
Published in: 2018
Publisher: N/A

Acid treated chitin attenuates virulence expression in Listeria monocytogenes. Oral presentation.

Author(s): M. Villoria Recio, H. Ingmer, M. Halberg Larsen
Published in: 2018
Publisher: N/A

The impact of temperature on the response of L. monocytogenes to visible light. Oral presentation

Author(s): A Dorey, B. O’Donoghue, C. Bennett, A. Conneely, C. O’Byrne
Published in: 2018
Publisher: N/A

Listeria monocytogenes planktonic and sessile cells adaptation to temperatures seen through shotgun proteomics. Oral presentation.

Author(s): T. Santos, C. Chambon, D. Viala, J. Estebin, M. Hébraud
Published in: 2018
Publisher: N/A

Glycerol metabolism induces Listeria monocytogenes biofilm formation at the air-liquid interface.Oral presentation.

Author(s): N. Crespo Tapia, H MW. Den Besten, T. Abee
Published in: 2018
Publisher: N/A

The small regulatory RNAs LhrC1-5 contribute to the response of Listeria monocytogenes to heme stress. Poster.

Author(s): P. Dos Santos, D. Sabharwal, J-H Christensen, M Z Brunhede, E M Sternkopf Lillebaek, B.H. Kallipolitis,
Published in: 2018
Publisher: N/A

Unravelling the regulatory role of the oB-dependent non-coding RNA Rli47 in Listeria monocytogenes.Poster

Author(s): C Marinho, P. Dos Santos, B. Kallipolitis, D. Garmyn, L. Gal, C. O’Byrne, P. Piveteau, C. O’Byrne
Published in: 2018
Publisher: N/A

Statistical modeling of bacterial promoter sequences for regulatory motif discovery with the help of transcription profiles. Oral presentation

Author(s): I Sultan, S. Schbath, P. Nicolas
Published in: 2018
Publisher: N/A

Association between Listeria monocytogenes genotypes and biofilm formations under food processing environements. Oral presentation

Author(s): B Lee, S. Cole, T. Bernardi, S. Badel, L. Guillier, P. Piveteau
Published in: 2018
Publisher: N/A

A family of sRNAs plays a role in the response of Listeria monocytogenes to heme toxicity. Poster

Author(s): P. Dos Santos, D. Sabharwal, P. Menendez-Gil, E.M. Sternkopf Lillebaek, B.H. Kallipolitis
Published in: 2017
Publisher: N/A

Adaptation of Listeria monocytogenes to temperature: exploration of intracellular subproteome through shotgun proteomics. Poster

Author(s): T. Santos, C. Chambon, D. Viala, J. Esbelin, M. Hébraud
Published in: 2017
Publisher: N/A

MALDI Imaging and Profiling Mass Spectrometry approach for the analysis of Listeria monocytogenes biofilms exposed to desiccation. Poster.

Author(s): T. Santos, L. Théron, C. Chambon, D. Viala, D. Centeno, M. Hébraud
Published in: 2017
Publisher: N/A

Développement d’une approche d’imagerie par spectrometrie de masse pour explorer des biofilms de Listeria monocytogenes exposés à un stress de déshumidification. Poster.

Author(s): T. Santos
Published in: 2017
Publisher: N/A

Approche protéomique pour explorer l’adaptation de Listeria monocytogenes à son environnement. Poster

Author(s): T. Santos
Published in: 2017
Publisher: N/A

Listeria monocytogenes planktonic and sessile cells adaptation to different temperatures seen through Shotgun proteomics. Poster.

Author(s): T. Santos, C. Chambon, D. Viala, J. Esbelin, M. Hébraud
Published in: 2018
Publisher: N/A

Modelling of Bacterial Transcription Factor Binding Sites. Poster

Author(s): I. Sultan
Published in: 2016
Publisher: N/A

Listeria monocytogenes planktonic and sessile cells adaptation to different temperatures seen through Shotgun proteomics. Oral presentation

Author(s): T. Santos, C. Chambon, D. Viala, J. Esbelin, M. Hébraud
Published in: 2018
Publisher: N/A

MALDI Mass Spectrometry Imaging and in situ microproteomics of Listeria monocytogenes Biofilms. Oral presentation

Author(s): T. Santos, L. Théron, C. Chambon, D. Viala, D. Centeno, M. Hébraud
Published in: 2018
Publisher: N/A

Statistical modeling of bacterial promoter sequences for regulatory motif discovery using expression data. Oral presentation

Author(s): I. Sultan, S. Schbath, P. Nicolas
Published in: 2018
Publisher: N/A

Statistical modelling of bacterial promoter sequences for regulatory motif discovery with the help of transcription profiles. Oral presentation

Author(s): I. Sultan, S. Schbath, P. Nicolas
Published in: 2018
Publisher: N/A

Improved Promoter sequence models for de novo Transcription Factor Binding site prediction in bacteria. Oral presentation

Author(s): I. Sultan, P. Nicolas, S. Schbath, V. Fromion
Published in: 2017
Publisher: N/A

Role of high-fat diet on host susceptibility to infection with Listeria monocytogenes. Oral presentation

Author(s): V. Las Heras, R. Rubio, P. Cotter, C. Hill, G. Gahan
Published in: 2017
Publisher: N/A

A high fat diet influences host susceptibility to Listeria monocytogenes infection in a murine disease model. Oral presentation

Author(s): V. Las Heras, R. Rubio, P. Cotter, C. Hill, G. Gahan
Published in: 2018
Publisher: N/A

Investigation into the Response of Listeria monocytogenes to 470 nm Blue Light

Author(s): A.L.Dorey, K.NicAogain, B.O'Donoghue, C.Bennett, A.Conneely, C.P O'Byrne
Published in: 2016
Publisher: National University of Ireland Galway

Impact of carbon sources on Listeria monocytogenes biofilm formation

Author(s): N. Crespo Tapia, S. Toson, H. Den Besten, T. Abee
Published in: 2016
Publisher: Wageningen University

Biofilm formation of Listeria monocytogenes strains in food processing environements

Author(s): B. Lee, S. Cole, M. Hébraud, T. Bernardi, S. Badel-Berchoux
Published in: 2017
Publisher: FEMS Congress

Improved promoter sequence models for de novo transcription factor binding site prediction in bacteria

Author(s): I. Sultan, S. Schbath, V. Fromion, P. Nicolas
Published in: 2017
Publisher: FEMS Congress

Glycerol metabolism induces biofilm formation at the air-liquid interface in Listeria monocytogenes

Author(s): N. Crespo Tapia, H.M. W. den Besten, T. Abee
Published in: 2017
Publisher: FEMS Congress

The effects of growth conditions and secondary environmental stresses on the response of Listeria monocytogenes to visible light

Author(s): A. L. Dorey, A. Oliveira, K. NicAogain, B. O'Donoghue, C. P. O'Byrne
Published in: 2017
Publisher: FEMS Congress

oB and agrA regulation in Listeria monocytogenes: effect on survival in soil/rhizosphere under biotic and abiotic conditions

Author(s): C. Marinho, D. Garmyn, L. Gal, C. O'Byrne, P. Piveteau
Published in: 2017
Publisher: FEMS Congress

Development of a MALDI Imaging Mass Spectrometry approach to bacterial proteomics: first application to Listeria monocytogenes biofilms exposed to desiccation

Author(s): T. Santos, L. Théron, D. Centeno, C. Chambon, D. Viala, M. Hébraud
Published in: 2017
Publisher: FEMS Congress

A family of sRNAs plays a role in the response of Listeria monocytogenes to heme toxicity

Author(s): P.T. dos Santos, D. Sabharwal, P. Menendez-Gil, E. M. Sternkopf Lillebaek, B. H. Kallipolitis
Published in: 2017
Publisher: FEMS Congress

Effect of habitat disturbances on the population dynamics of allochthon L. monocytogenes in soil

Author(s): A. Ortiz Camargo, L. Gal, A. Spor, S. Gaba, D. Garmyn, P. Piveteau
Published in: 2017
Publisher: FEMS 2017

Ecology of Listeria monocytogenes in soil: effect of the biotic environment on survival and transcriptome reshaping

Author(s): L. Gal, A. Ortiz Camargo, D. Garmyn, P. Piveteau
Published in: 2017
Publisher: FEMS 2017

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